Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P01380_001 | Banana | nucleus | 70.79 | 69.42 |
| GSMUA_Achr5P19610_001 | Banana | nucleus | 81.68 | 65.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.99 | 63.98 |
| VIT_05s0049g00510.t01 | Wine grape | nucleus | 54.95 | 53.37 |
| GSMUA_Achr4P05520_001 | Banana | nucleus, plastid | 42.08 | 52.8 |
| GSMUA_Achr4P12060_001 | Banana | nucleus | 50.99 | 50.0 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G22020_001 | EnsemblPlants:GSMUA_Achr11P22020_001 | EnsemblPlants:GSMUA_Achr11T22020_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RUD2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF67 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002962418 | SEG:seg |
Description
Putative Ethylene-responsive transcription factor 1B [Source:GMGC_GENE;Acc:GSMUA_Achr11G22020_001]
Coordinates
chr11:+:22437730..22438709
Molecular Weight (calculated)
22401.9 Da
IEP (calculated)
4.400
GRAVY (calculated)
-0.533
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYYLFDSLN HEHSPESSTG STEPFPWAGV GLFYPDVPLP FNMDDSEEML LLGMLAEASG KASSSSEACD RSVIRAKEEE VDSRSKAADE PKEKSYRGVR
101: KRPWGKFAAE IRDSTRHGIR VWLGTFDSAE AAALAYDQAA FSMRGSMAVL NFPVERWMNK KAKESETSSS SSSSVESVLE LEDLGTEYLE ELLRTSEVAN
201: TC
101: KRPWGKFAAE IRDSTRHGIR VWLGTFDSAE AAALAYDQAA FSMRGSMAVL NFPVERWMNK KAKESETSSS SSSSVESVLE LEDLGTEYLE ELLRTSEVAN
201: TC
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.