Factsheet for GSMUA_Achr1P21910_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus, plastid, vacuole	20.11	76.84
GSMUA_Achr9P16070_001	Banana	extracellular, golgi	51.24	75.3
Zm00001d020636_P001	Maize	extracellular	73.55	74.17
HORVU5Hr1G061770.1	Barley	extracellular, golgi, vacuole	73.83	74.03
EER96801	Sorghum	endoplasmic reticulum, vacuole	73.55	73.55
TraesCS5D01G216300.1	Wheat	unclear	72.73	73.13
TraesCS5B01G208100.1	Wheat	vacuole	72.18	72.58
Os09t0442300-01	Rice	extracellular	73.83	72.24
TraesCS5A01G210100.1	Wheat	unclear	71.9	71.51
Zm00001d005828_P003	Maize	cytosol, nucleus, plastid	58.68	70.76
VIT_11s0016g01070.t01	Wine grape	extracellular	70.52	70.72
KRH02604	Soybean	vacuole	67.49	69.41
KRH12540	Soybean	extracellular	67.22	68.93
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	68.04	68.8
CDY09213	Canola	vacuole	67.77	68.52
CDY09216	Canola	vacuole	67.49	68.25
AT3G45310.1	Thale cress	extracellular, vacuole	67.22	68.16
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	66.94	67.69
CDY31550	Canola	endoplasmic reticulum, extracellular, vacuole	66.67	67.41
CDX80173	Canola	endoplasmic reticulum	66.39	67.32
PGSC0003DMT400048984	Potato	extracellular	65.56	66.85
Solyc07g041900.2.1	Tomato	extracellular	64.46	65.73
AT5G60360.3	Thale cress	endoplasmic reticulum, extracellular, vacuole	65.01	65.37
PGSC0003DMT400071690	Potato	vacuole	64.46	65.18
KRG98609	Soybean	mitochondrion	53.44	65.1
CDY19784	Canola	cytosol, nucleus, plastid	41.6	62.92
KRG99207	Soybean	cytosol, nucleus, plastid	43.53	59.18
Bra036565.1-P	Field mustard	extracellular	35.81	59.09
KRH37496	Soybean	vacuole	65.29	58.37
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	41.32	57.69
KRH13188	Soybean	peroxisome	13.77	56.18
CDX88753	Canola	vacuole	45.18	46.99
CDX71045	Canola	endoplasmic reticulum	44.9	45.03
CDX71035	Canola	vacuole	40.5	42.86
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	35.54	35.25
GSMUA_Achr3P17220_001	Banana	nucleus	28.37	34.68
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	32.78	32.96
GSMUA_Achr6P27980_001	Banana	vacuole	33.33	32.53
CDX88755	Canola	extracellular, plasma membrane, vacuole	35.54	31.54
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.37	29.94
Bra006666.1-P	Field mustard	vacuole	33.06	26.79
GSMUA_Achr3P24740_001	Banana	vacuole	22.59	22.84
GSMUA_Achr8P06100_001	Banana	vacuole	22.59	22.34

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G21910_001
EnsemblPlants:GSMUA_Achr1P21910_001	EnsemblPlants:GSMUA_Achr1T21910_001	UniProt:M0S1Z9	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF544	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029625EB
SEG:seg	:	:	:	:	:

Description

Oryzain gamma chain [Source:GMGC_GENE;Acc:GSMUA_Achr1G21910_001]

Coordinates

chr1:+:16433165..16440223

Molecular Weight (calculated)

39513.6 Da

IEP (calculated)

7.164

GRAVY (calculated)

-0.122

Length

363 amino acids

Sequence
(BLAST)

001: MATDRHHPAL AVGVGVLLLV LSSATAFSTF DEANPIRSVT DRVRSADATV IRALGLSRHA LDFARFAHRY GKSYGSAAEI RRRFGIFVEN LELIRSTNRR
101: GLPYTLAINR FADWSWEEFQ AGRLGAAQNC SATDRGNHLL TDAVVPDTKD WREVGIVSPV KNQGHCGSCW TFSTTGALEA AYAQATGKNI SLSEQQLVDC
201: ARAFNNFGCN GGLPSQAFEY IKYNGGIDTE ESYPYSATNG ICSFKPENVG VKVTASVNIT KGAEDELKHA VGLVRPVSVA FQVVRDFRFY KGGVYTSETC
301: GNTELDVNHA VLAVGYGVEN GIPYWLIKNS WGSDWGLDGY FKMELGKNMC GIATCASYPI IAV

Best Arabidopsis Sequence Match ( AT3G45310.1 )
(BLAST)

001: MSVKLNLSSS ILLILFAAAA SKEIGFDESN PIKMVSDNLH ELEDTVVQIL GQSRHVLSFS RFTHRYGKKY QSVEEMKLRF SVFKENLDLI RSTNKKGLSY
101: KLSLNQFADL TWQEFQRYKL GAAQNCSATL KGSHKITEAT VPDTKDWRED GIVSPVKEQG HCGSCWTFST TGALEAAYHQ AFGKGISLSE QQLVDCAGTF
201: NNFGCHGGLP SQAFEYIKYN GGLDTEEAYP YTGKDGGCKF SAKNIGVQVR DSVNITLGAE DELKHAVGLV RPVSVAFEVV HEFRFYKKGV FTSNTCGNTP
301: MDVNHAVLAV GYGVEDDVPY WLIKNSWGGE WGDNGYFKME MGKNMCGVAT CSSYPVVA

Arabidopsis Description

Thiol protease aleurain-like [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.