Factsheet for TraesCS5D01G216300.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 1
extracellular 6
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G208100.1	Wheat	vacuole	98.61	98.61
TraesCS5A01G210100.1	Wheat	unclear	98.06	96.99
HORVU5Hr1G061770.1	Barley	extracellular, golgi, vacuole	96.95	96.69
Zm00001d020636_P001	Maize	extracellular	85.6	85.83
EER96801	Sorghum	endoplasmic reticulum, vacuole	84.76	84.3
Os09t0442300-01	Rice	extracellular	85.32	83.02
Zm00001d005828_P003	Maize	cytosol, nucleus, plastid	65.37	78.41
GSMUA_Achr1P21910_001	Banana	plasma membrane	73.13	72.73
CDY31550	Canola	endoplasmic reticulum, extracellular, vacuole	70.91	71.31
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	70.64	71.03
CDX80173	Canola	endoplasmic reticulum	70.36	70.95
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	69.25	69.64
VIT_11s0016g01070.t01	Wine grape	extracellular	69.81	69.61
GSMUA_AchrUn_...	Banana	nucleus, plastid, vacuole	18.28	69.47
KRH02604	Soybean	vacuole	67.87	69.41
CDY09216	Canola	vacuole	68.98	69.36
PGSC0003DMT400048984	Potato	extracellular	67.31	68.26
CDY09213	Canola	vacuole	67.87	68.25
AT3G45310.1	Thale cress	extracellular, vacuole	67.04	67.6
Solyc07g041900.2.1	Tomato	extracellular	66.2	67.13
KRH12540	Soybean	extracellular	65.65	66.95
AT5G60360.3	Thale cress	endoplasmic reticulum, extracellular, vacuole	66.48	66.48
PGSC0003DMT400071690	Potato	vacuole	64.27	64.62
KRG98609	Soybean	mitochondrion	52.08	63.09
KRH13188	Soybean	peroxisome	14.96	60.67
CDY19784	Canola	cytosol, nucleus, plastid	39.89	60.0
KRG99207	Soybean	cytosol, nucleus, plastid	42.11	56.93
KRH37496	Soybean	vacuole	63.71	56.65
Bra036565.1-P	Field mustard	extracellular	33.8	55.45
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	39.89	55.38
CDX88753	Canola	vacuole	43.49	44.99
CDX71045	Canola	endoplasmic reticulum	43.49	43.37
CDX71035	Canola	vacuole	38.23	40.23
TraesCS2D01G200500.1	Wheat	extracellular	34.9	34.05
TraesCS2D01G272400.1	Wheat	endoplasmic reticulum, golgi	33.24	32.7
TraesCS5D01G332200.1	Wheat	extracellular	33.52	32.1
CDX88755	Canola	extracellular, plasma membrane, vacuole	34.35	30.32
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.7	29.07
TraesCS4D01G061400.1	Wheat	extracellular	24.65	25.95
Bra006666.1-P	Field mustard	vacuole	31.3	25.22

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF544
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G216300	EnsemblPlants:TraesCS5D01G216300.1	TIGR:cd02248	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:325092548..325096095

Molecular Weight (calculated)

39128.0 Da

IEP (calculated)

6.396

GRAVY (calculated)

-0.146

Length

361 amino acids

Sequence
(BLAST)

001: MAHARILLLA LAVLATAAVA VASSSFADSN PIRPVTERAA STLESTVLAA LGRTRHALRF ARFAVRYGKS YESAAEVRRR FRIFSESLEE VRSTNRKGLP
101: YRLGINRFSD MSWEEFQATR LGAAQTCSAT LAGNHLMRDA AALPETKDWR EDGIVSPVKD QSHCGSCWTF STTGALEAAY TQATGKNISL SEQQLVDCAG
201: GFNNFGCSGG LPSQAFEYIK YNGGIDTEES YPYKGVNGVC HYKAENAVVQ VLDSVNITLN AEDELKNAVG LVRPVSVAFE VIDGFRQYKS GVYTSDHCGT
301: TPDDVNHAVL AVGYGVENGV PYWLIKNSWG ADWGDNGYFK MEMGKNMCAV ATCASYPIVA A

Best Arabidopsis Sequence Match ( AT5G60360.1 )
(BLAST)

001: MSAKTILSSV VLVVLVAASA AANIGFDESN PIRMVSDGLR EVEESVSQIL GQSRHVLSFA RFTHRYGKKY QNVEEMKLRF SIFKENLDLI RSTNKKGLSY
101: KLGVNQFADL TWQEFQRTKL GAAQNCSATL KGSHKVTEAA LPETKDWRED GIVSPVKDQG GCGSCWTFST TGALEAAYHQ AFGKGISLSE QQLVDCAGAF
201: NNYGCNGGLP SQAFEYIKSN GGLDTEKAYP YTGKDETCKF SAENVGVQVL NSVNITLGAE DELKHAVGLV RPVSIAFEVI HSFRLYKSGV YTDSHCGSTP
301: MDVNHAVLAV GYGVEDGVPY WLIKNSWGAD WGDKGYFKME MGKNMCGIAT CASYPVVA

Arabidopsis Description

AALPAleurain-like protease [Source:UniProtKB/TrEMBL;Acc:A8MQZ1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.