Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G252800.1 | Wheat | unclear | 98.54 | 98.26 |
| TraesCS4B01G062500.1 | Wheat | extracellular | 98.25 | 98.25 |
| KXG36303 | Sorghum | vacuole | 80.17 | 77.46 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 51.31 | 70.97 |
| Zm00001d021615_P002 | Maize | extracellular, plasma membrane, vacuole | 73.18 | 68.39 |
| KRG96636 | Soybean | nucleus | 66.76 | 64.33 |
| PGSC0003DMT400026850 | Potato | extracellular | 46.06 | 63.97 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 66.18 | 63.23 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 67.64 | 63.22 |
| KRH68369 | Soybean | nucleus | 65.6 | 63.03 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 95.04 | 62.21 |
| Bra030498.1-P | Field mustard | vacuole | 63.85 | 61.34 |
| Solyc02g069090.2.1 | Tomato | extracellular | 62.68 | 61.08 |
| Bra036321.1-P | Field mustard | vacuole | 62.97 | 60.34 |
| CDY58223 | Canola | vacuole | 62.39 | 59.78 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 62.97 | 59.67 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 63.27 | 59.62 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 62.39 | 59.61 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 59.18 | 59.53 |
| CDY07129 | Canola | extracellular | 61.81 | 59.22 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 58.31 | 56.5 |
| AT1G02300.1 | Thale cress | extracellular | 60.35 | 54.62 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 62.39 | 54.59 |
| Solyc02g069100.2.1 | Tomato | plastid | 55.39 | 53.67 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 26.82 | 52.57 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 14.58 | 52.08 |
| Os05t0310500-02 | Rice | extracellular | 22.74 | 40.41 |
| CDY38163 | Canola | golgi, vacuole | 18.37 | 39.38 |
| Bra039903.1-P | Field mustard | extracellular, golgi, vacuole | 22.16 | 33.04 |
| TraesCS5D01G216300.1 | Wheat | unclear | 25.95 | 24.65 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 23.32 | 21.22 |
| TraesCS2D01G200500.1 | Wheat | extracellular | 22.74 | 21.08 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 21.28 | 19.89 |
| CDY14798 | Canola | extracellular | 2.04 | 5.74 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 |
| PFAM:PF00112 | PFAM:PF08127 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Propeptide_C1A | SMART:SM00645 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4D01G061400 | EnsemblPlants:TraesCS4D01G061400.1 |
| TIGR:cd02620 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:37134966..37138058
Molecular Weight (calculated)
37424.5 Da
IEP (calculated)
6.680
GRAVY (calculated)
-0.214
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLLPLALL VVLSAAAAAP QLVGAAGRDH SLGIIQKDII QTVNNHPNAG WTAGHNPYLA NYTIEQFKHM LGVKPTPPGL RAGVRTKTHL RSEQLPKVFD
101: ARSKWSGCST IGKILDQGHC GSCWAFGAVE CLQDRFCIHH NMNITLSAND LVACCGFMCG DGCDGGYPIS AWQYFVQNGV VTDECDPYFD QVGCKHPGCE
201: PAYPTPVCEK KCKVQNQVWE EKKRFSINAY QVNSDPHEIM AEVYKNGPVE VAFTVYEDFA HYKSGVYKHI TGGVMGGHAV KLIGWGTSDA GEDYWLLANQ
301: WNRGWGDDGY FKIIRGKNEC GIEEDVTAGM PSTKNIAGSA FAI
101: ARSKWSGCST IGKILDQGHC GSCWAFGAVE CLQDRFCIHH NMNITLSAND LVACCGFMCG DGCDGGYPIS AWQYFVQNGV VTDECDPYFD QVGCKHPGCE
201: PAYPTPVCEK KCKVQNQVWE EKKRFSINAY QVNSDPHEIM AEVYKNGPVE VAFTVYEDFA HYKSGVYKHI TGGVMGGHAV KLIGWGTSDA GEDYWLLANQ
301: WNRGWGDDGY FKIIRGKNEC GIEEDVTAGM PSTKNIAGSA FAI
001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
Arabidopsis Description
CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.