Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64994 | Canola | cytosol, nucleus, vacuole | 69.21 | 95.16 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 95.31 | 89.29 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 85.92 | 80.94 |
| AT1G02300.1 | Thale cress | extracellular | 78.89 | 70.98 |
| CDY07129 | Canola | extracellular | 73.9 | 70.39 |
| CDY58223 | Canola | vacuole | 73.61 | 70.11 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 34.6 | 67.43 |
| TraesCS4A01G252900.1 | Wheat | extracellular | 62.46 | 60.68 |
| TraesCS4B01G062400.1 | Wheat | extracellular | 61.88 | 59.94 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 61.58 | 59.32 |
| TraesCS4A01G252800.1 | Wheat | unclear | 59.82 | 59.3 |
| TraesCS4B01G062500.1 | Wheat | extracellular | 59.53 | 59.18 |
| TraesCS4D01G061400.1 | Wheat | extracellular | 59.53 | 59.18 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 62.76 | 58.31 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 61.29 | 58.22 |
| KXG36303 | Sorghum | vacuole | 60.41 | 58.03 |
| TraesCS4A01G252700.1 | Wheat | extracellular | 57.48 | 56.81 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 64.81 | 56.38 |
| TraesCS4B01G062600.1 | Wheat | vacuole | 58.06 | 55.0 |
| CDY38163 | Canola | golgi, vacuole | 24.93 | 53.12 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 14.37 | 51.04 |
| HORVU4Hr1G010360.3 | Barley | vacuole | 57.48 | 48.76 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 60.41 | 39.31 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 19.35 | 27.5 |
| Os05t0310500-02 | Rice | extracellular | 15.54 | 27.46 |
| CDX80173 | Canola | endoplasmic reticulum | 24.63 | 23.46 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 24.63 | 23.4 |
| Zm00001d022297_P001 | Maize | cytosol, extracellular, nucleus | 4.99 | 23.29 |
| CDY09216 | Canola | vacuole | 24.34 | 23.12 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 22.87 | 22.74 |
| CDY09213 | Canola | vacuole | 23.75 | 22.56 |
| CDY71205 | Canola | vacuole | 23.75 | 22.01 |
| CDY13816 | Canola | cytosol | 18.18 | 21.91 |
| CDX90310 | Canola | vacuole | 23.46 | 21.68 |
| CDY15894 | Canola | endoplasmic reticulum | 22.87 | 21.55 |
| CDY34441 | Canola | endoplasmic reticulum | 22.87 | 21.2 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.87 | 21.2 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.29 | 20.71 |
| CDX88753 | Canola | vacuole | 21.11 | 20.63 |
| CDY56961 | Canola | endoplasmic reticulum | 21.99 | 20.6 |
| CDX73424 | Canola | extracellular | 21.99 | 20.6 |
| CDX71035 | Canola | vacuole | 20.23 | 20.12 |
| CDX90537 | Canola | endoplasmic reticulum | 21.41 | 19.95 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 21.41 | 19.95 |
| CDX82031 | Canola | nucleus | 14.66 | 18.87 |
| CDX71045 | Canola | endoplasmic reticulum | 19.35 | 18.23 |
| CDY42605 | Canola | plastid | 9.97 | 16.04 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 17.3 | 14.43 |
| CDY14798 | Canola | extracellular | 1.47 | 4.1 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078D7N8 | EnsemblPlants:CDX85150 | ProteinID:CDX85150 | ProteinID:CDX85150.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 | EnsemblPlantsGene:GSBRNA2T00142718001 | PFAM:PF00112 |
| PFAM:PF08127 | PRINTS:PR00705 | ScanProsite:PS00639 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Propeptide_C1A | SMART:SM00645 | SUPFAM:SSF54001 |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE6513 | : | : | : |
Description
BnaC07g07560D
Coordinates
chrLK031840:+:1464854..1467332
Molecular Weight (calculated)
37833.6 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.285
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHHHRIRV YLASAILLLA VINTGIAAEN LSEQKLTSRI LQNEIVKEVN ENPNAGWTAA FNDRFANSTV AEFKRLLGVK PTPKNEFLGV PVNCLVSVLQ
101: HWKDPRSGHC GSCWAFGAVE SLSDRFCIKY NMNISLSVND LLACCGFLCG QGCNGGYPIS AWRYFKHHGV VTEECDPYFD NTGCSHPGCE PAYPTPKCVR
201: KCVSGNQLWR ESKHYGVSAY KVRHDPQDIM AEVYKNGPVE VAFTVYEDFA HYKSGVYKHI TGANIGGHAV KLIGWGTSDD GEDYWLLANQ WNRSWGDDGY
301: FKIKRGTNEC GIEHGVVAGL PSDRNVFNGI NTSDDVLVSS F
101: HWKDPRSGHC GSCWAFGAVE SLSDRFCIKY NMNISLSVND LLACCGFLCG QGCNGGYPIS AWRYFKHHGV VTEECDPYFD NTGCSHPGCE PAYPTPKCVR
201: KCVSGNQLWR ESKHYGVSAY KVRHDPQDIM AEVYKNGPVE VAFTVYEDFA HYKSGVYKHI TGANIGGHAV KLIGWGTSDD GEDYWLLANQ WNRSWGDDGY
301: FKIKRGTNEC GIEHGVVAGL PSDRNVFNGI NTSDDVLVSS F
001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
Arabidopsis Description
CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.