Factsheet for TraesCS4A01G252700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G062600.1	Wheat	vacuole	96.52	92.5
TraesCS4A01G252800.1	Wheat	unclear	87.25	87.5
HORVU4Hr1G010360.3	Barley	vacuole	96.52	82.84
TraesCS4A01G252900.1	Wheat	extracellular	77.97	76.64
KXG36303	Sorghum	vacuole	77.1	74.93
CDY64994	Canola	cytosol, nucleus, vacuole	48.41	67.34
Zm00001d021615_P002	Maize	extracellular, plasma membrane, vacuole	70.43	66.21
KRG96636	Soybean	nucleus	65.22	63.2
PGSC0003DMT400026850	Potato	extracellular	45.22	63.16
GSMUA_Achr3P24740_001	Banana	vacuole	64.64	62.12
KRH68369	Soybean	nucleus	64.06	61.9
GSMUA_Achr8P06100_001	Banana	vacuole	64.93	61.04
Bra036321.1-P	Field mustard	vacuole	62.03	59.78
Bra030498.1-P	Field mustard	vacuole	61.45	59.38
Solyc02g069090.2.1	Tomato	extracellular	60.58	59.38
CDY58223	Canola	vacuole	61.45	59.22
AT1G02305.1	Thale cress	extracellular, vacuole	62.03	59.12
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	61.45	59.05
CDY07129	Canola	extracellular	60.87	58.66
CDY61859	Canola	extracellular, golgi, vacuole	60.87	57.69
CDX85150	Canola	extracellular, golgi, vacuole	56.81	57.48
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	57.39	55.93
AT1G02300.1	Thale cress	extracellular	59.42	54.09
Solyc02g069100.2.1	Tomato	plastid	54.2	52.82
VIT_07s0005g02820.t01	Wine grape	vacuole	59.42	52.3
CDY64824	Canola	cytosol, mitochondrion, vacuole	26.09	51.43
KRH49642	Soybean	endoplasmic reticulum, extracellular	13.33	47.92
Os05t0310500-02	Rice	extracellular	23.48	41.97
CDY38163	Canola	golgi, vacuole	18.26	39.38
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	21.45	32.17
TraesCS5A01G210100.1	Wheat	unclear	23.77	22.47
TraesCS2A01G187400.1	Wheat	extracellular	21.16	20.17
TraesCS2A01G273100.1	Wheat	golgi	21.74	19.79
TraesCS5A01G326100.1	Wheat	golgi	21.45	19.63
CDY14798	Canola	extracellular	2.32	6.56

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	GO:GO:0050790
PFAM:PF00112	PFAM:PF08127	PRINTS:PR00705	ScanProsite:PS00139	PANTHER:PTHR12411	PANTHER:PTHR12411:SF516
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Propeptide_C1A	SMART:SM00645
SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G252700	EnsemblPlants:TraesCS4A01G252700.1	TIGR:cd02620	SEG:seg

Description

No Description!

Coordinates

chr4A:+:564971277..564974497

Molecular Weight (calculated)

37555.4 Da

IEP (calculated)

5.334

GRAVY (calculated)

-0.160

Length

345 amino acids

Sequence
(BLAST)

001: MGGLLPLALL VVLSAAAAAP QLVGAARGDH SLPIIQEDII RTVNNHPNAG WTAGHNPYLA NYTIEQFKHI LGVKPTPPGL LAGVPTKTYS RSEKEDLPKE
101: FDARSKWSGC TTIGKILDQG HCGACWAFGA VECLQDRFCI HHGVNVSLSV NDIVACCGFL CGDGCDGGYP IFAWQYFVEN GVVTDECDPF FDQVGCQHPG
201: CEPAYPTPVC EKKCKVQNQV WEEKKHFSVD AYQVNSDPHD IMAEVYKNGP VEVSFIIYED FAHYKSGVYK QITGRMVGGH AAKLIGWGTS DAGEDYWLLA
301: NQWNRGWGED GYFKVIRGMN ECGIEGDVNA GMPSTKNIAG SAFAI

Best Arabidopsis Sequence Match ( AT1G02300.1 )
(BLAST)

001: MADSCCIRLH LLASVFLLLF SSFNLQGIAA ENLSKQKLTS LILQNEIVKE VNENPNAGWK AAFNDRFANA TVAEFKRLLG VIQTPKTAYL GVPIVRHDLS
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV

Arabidopsis Description

CATHB1Cathepsin B-like protease 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HVZ1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.