Factsheet for Solyc02g069110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g075780.1.1
Solyc11g073060.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02305.1	Solyc06g075780.1.1	AT3G46090.1	17259181
AT1G02305.1	Solyc11g073060.1.1	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026850	Potato	extracellular	62.43	89.47
Solyc02g069090.2.1	Tomato	extracellular	77.68	78.12
Solyc02g069100.2.1	Tomato	plastid	72.6	72.6
KRG96636	Soybean	nucleus	66.67	66.29
KRH68369	Soybean	nucleus	65.25	64.71
AT1G02305.1	Thale cress	extracellular, vacuole	66.1	64.64
Bra030498.1-P	Field mustard	vacuole	64.97	64.43
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	63.84	62.95
GSMUA_Achr3P24740_001	Banana	vacuole	63.28	62.4
GSMUA_Achr8P06100_001	Banana	vacuole	63.56	61.31
Bra036321.1-P	Field mustard	vacuole	61.86	61.17
HORVU4Hr1G010300.11	Barley	extracellular	60.17	60.17
TraesCS4A01G252900.1	Wheat	extracellular	59.6	60.11
AT1G02300.1	Thale cress	extracellular	64.12	59.89
TraesCS4B01G062400.1	Wheat	extracellular	58.76	59.09
KXG36303	Sorghum	vacuole	58.76	58.59
TraesCS4A01G252800.1	Wheat	unclear	56.78	58.43
TraesCS4D01G061400.1	Wheat	extracellular	56.5	58.31
TraesCS4B01G062500.1	Wheat	extracellular	56.5	58.31
VIT_07s0005g02820.t01	Wine grape	vacuole	64.12	57.91
TraesCS4A01G252700.1	Wheat	extracellular	55.93	57.39
TraesCS4B01G062600.1	Wheat	vacuole	55.65	54.72
HORVU4Hr1G010360.3	Barley	vacuole	55.65	49.01
KRH49642	Soybean	endoplasmic reticulum, extracellular	13.28	48.96
HORVU4Hr1G010390.14	Barley	vacuole	57.63	38.93
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	22.6	34.78
Os05t0310500-02	Rice	extracellular	18.64	34.2
Zm00001d022297_P001	Maize	cytosol, extracellular, nucleus	6.21	30.14
Solyc07g041900.2.1	Tomato	extracellular	24.29	24.16
Solyc04g080960.2.1	Tomato	extracellular	22.32	21.76
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	22.32	21.41
Solyc11g008260.1.1	Tomato	extracellular	21.75	19.95
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	13.56	18.46
CDY14798	Canola	extracellular	1.69	4.92

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	MEROPS:C01.049	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197
GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0050790	GO:GO:0051603
UniProt:K4B7P3	PFAM:PF00112	PFAM:PF08127	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639
PANTHER:PTHR12411	PANTHER:PTHR12411:SF516	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Propeptide_C1A	SMART:SM00645	SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g069110.2
EnsemblPlants:Solyc02g069110.2.1	TMHMM:TMhelix	UniParc:UPI0002767EDC	:	:	:

Description

No Description!

Coordinates

chr2:-:39069832..39072797

Molecular Weight (calculated)

39412.9 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.212

Length

354 amino acids

Sequence
(BLAST)

001: MGMNKMFLPT PLLLCAFFIF ILQVVAEKPI SEAKGESVIL RESIIKEVNE NGKAGWKAAF NPRFSNFTVS QFKRLLGVKP PREGDLKSIP ILTHPKLKNL
101: PKEFDARTAW SECSTIGRIL DQGHCGSCWA FGAVESLSDR FCIHYGLNIS LSVNDVIACC GFHCGNGCDG GSPIAAWHYF IRKGVVSEKC DPYFDNIGCS
201: HPGCEPTYPT PQCNRKCVNE NLLWSKSKHF GVNAYMISSN PYSIMTEVYK NGPVEVALNV YEDFAHYKSG VYKHVTGEYI GGHAVKLIGW GTSEEGEDYW
301: LLVNSWNKGW GNDGYFKIRR GTNECDIESN VVAGLPSARN LNVELDDDFL DTSM

Best Arabidopsis Sequence Match ( AT1G02305.1 )
(BLAST)

001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF

Arabidopsis Description

CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.