Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G252900.1 | Wheat | extracellular | 93.79 | 94.59 |
| TraesCS4B01G062400.1 | Wheat | extracellular | 93.79 | 94.32 |
| KXG36303 | Sorghum | vacuole | 74.58 | 74.37 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 50.85 | 72.58 |
| HORVU4Hr1G010360.3 | Barley | vacuole | 75.99 | 66.92 |
| Zm00001d021615_P002 | Maize | extracellular, plasma membrane, vacuole | 68.93 | 66.48 |
| KRG96636 | Soybean | nucleus | 66.67 | 66.29 |
| KRH68369 | Soybean | nucleus | 65.82 | 65.27 |
| PGSC0003DMT400026850 | Potato | extracellular | 45.48 | 65.18 |
| Bra030498.1-P | Field mustard | vacuole | 64.69 | 64.15 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 64.69 | 63.26 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 64.12 | 62.36 |
| Solyc02g069090.2.1 | Tomato | extracellular | 61.86 | 62.22 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 62.99 | 62.12 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 62.99 | 62.12 |
| Bra036321.1-P | Field mustard | vacuole | 62.71 | 62.01 |
| CDY07129 | Canola | extracellular | 62.71 | 62.01 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 59.32 | 61.58 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 63.84 | 61.58 |
| CDY58223 | Canola | vacuole | 62.15 | 61.45 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 60.17 | 60.17 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 28.81 | 58.29 |
| Solyc02g069100.2.1 | Tomato | plastid | 57.91 | 57.91 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 62.99 | 56.89 |
| AT1G02300.1 | Thale cress | extracellular | 60.17 | 56.2 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 79.66 | 53.82 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 13.84 | 51.04 |
| Os05t0310500-02 | Rice | extracellular | 22.88 | 41.97 |
| CDY38163 | Canola | golgi, vacuole | 18.08 | 40.0 |
| Bra039903.1-P | Field mustard | extracellular, golgi, vacuole | 22.03 | 33.91 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 19.21 | 27.42 |
| HORVU7Hr1G074340.1 | Barley | plastid | 17.8 | 26.03 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 18.93 | 25.57 |
| HORVU5Hr1G061770.1 | Barley | extracellular, golgi, vacuole | 25.14 | 24.59 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 23.16 | 21.75 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 23.16 | 20.6 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 19.49 | 18.25 |
| CDY14798 | Canola | extracellular | 1.69 | 4.92 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A287N6G0 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0050790 | EnsemblPlantsGene:HORVU4Hr1G010300 | EnsemblPlants:HORVU4Hr1G010300.11 | PFAM:PF00112 | PFAM:PF08127 | PRINTS:PR00705 |
| ScanProsite:PS00139 | ScanProsite:PS00639 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Propeptide_C1A | SMART:SM00645 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B46D003 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr4H:+:30750780..30755045
Molecular Weight (calculated)
38552.7 Da
IEP (calculated)
6.773
GRAVY (calculated)
-0.186
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVGVSLVL LAAAVVISAV AAAPQLVGAA KAEHSLGIIQ QEDIIQTVND HPNAGWTAGH NPYFANYTIE QFKHILGVKP TPPGLLAGVP IKTHPKSADL
101: PKEFDARTQW SSCSTIGNIL DQGHCGACWA FAAVESLQDR FCIHLNMSVS LSVNDLLACC GFLCGSGCNG GYPISAWRYF RRSGVVTEEC DPYFDQTGCQ
201: HPGCEPAYPT PKCHRKCKVE NQVWKKNKHF SVNVYRVHSN PHDIMAEVYK NGPVEVAFTV YEDFAHYKSG VYKHITGGVM GGHAVKLIGW GTSDAGEDYW
301: LLANQWNRGW GDDGYFKIIR GKNECGIEED VTAGMPSTKN MDRNNDVAFG TAIL
101: PKEFDARTQW SSCSTIGNIL DQGHCGACWA FAAVESLQDR FCIHLNMSVS LSVNDLLACC GFLCGSGCNG GYPISAWRYF RRSGVVTEEC DPYFDQTGCQ
201: HPGCEPAYPT PKCHRKCKVE NQVWKKNKHF SVNVYRVHSN PHDIMAEVYK NGPVEVAFTV YEDFAHYKSG VYKHITGGVM GGHAVKLIGW GTSDAGEDYW
301: LLANQWNRGW GDDGYFKIIR GKNECGIEED VTAGMPSTKN MDRNNDVAFG TAIL
001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
Arabidopsis Description
CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.