Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G02305.1 | Thale cress | extracellular, vacuole | 81.53 | 85.36 |
| Bra030498.1-P | Field mustard | vacuole | 76.78 | 81.51 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 53.03 | 81.05 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 76.78 | 79.95 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 70.98 | 78.89 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 70.71 | 74.65 |
| PGSC0003DMT400026850 | Potato | extracellular | 45.91 | 70.45 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 31.4 | 68.0 |
| Solyc02g069090.2.1 | Tomato | extracellular | 62.53 | 67.33 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 59.89 | 64.12 |
| TraesCS4A01G252900.1 | Wheat | extracellular | 56.46 | 60.97 |
| TraesCS4B01G062400.1 | Wheat | extracellular | 56.46 | 60.8 |
| TraesCS4A01G252800.1 | Wheat | unclear | 54.88 | 60.47 |
| Solyc02g069100.2.1 | Tomato | plastid | 56.46 | 60.45 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 57.26 | 60.45 |
| TraesCS4B01G062500.1 | Wheat | extracellular | 54.62 | 60.35 |
| TraesCS4D01G061400.1 | Wheat | extracellular | 54.62 | 60.35 |
| KXG36303 | Sorghum | vacuole | 56.46 | 60.28 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 56.2 | 60.17 |
| TraesCS4A01G252700.1 | Wheat | extracellular | 54.09 | 59.42 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 57.52 | 59.4 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 59.63 | 57.65 |
| TraesCS4B01G062600.1 | Wheat | vacuole | 54.35 | 57.22 |
| CDY38163 | Canola | golgi, vacuole | 24.01 | 56.88 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 13.46 | 53.12 |
| HORVU4Hr1G010360.3 | Barley | vacuole | 53.56 | 50.5 |
| Bra039903.1-P | Field mustard | extracellular, golgi, vacuole | 26.91 | 44.35 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 55.41 | 40.08 |
| Os05t0310500-02 | Rice | extracellular | 16.89 | 33.16 |
| Zm00001d022297_P001 | Maize | cytosol, extracellular, nucleus | 5.28 | 27.4 |
| AT3G45310.1 | Thale cress | extracellular, vacuole | 22.43 | 23.74 |
| AT5G60360.3 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 22.43 | 23.55 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 20.32 | 21.33 |
| AT4G39090.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 20.58 | 21.2 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 20.84 | 21.18 |
| AT3G54940.2 | Thale cress | endoplasmic reticulum, extracellular | 20.05 | 20.71 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EntrezGene:839576 | ProteinID:AAC24376.1 | ProteinID:AEE27412.1 | ArrayExpress:AT1G02300 |
| EnsemblPlantsGene:AT1G02300 | RefSeq:AT1G02300 | TAIR:AT1G02300 | RefSeq:AT1G02300-TAIR-G | EnsemblPlants:AT1G02300.1 | TAIR:AT1G02300.1 |
| UniProt:F4HVZ1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
| GO:GO:0006508 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 |
| GO:GO:0051603 | RefSeq:NP_563647.1 | PFAM:PF00112 | PFAM:PF08127 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00705 | ScanProsite:PS00639 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Propeptide_C1A | SMART:SM00645 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000162C08 |
| SEG:seg | : | : | : | : | : |
Description
CATHB1Cathepsin B-like protease 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HVZ1]
Coordinates
chr1:+:453107..455519
Molecular Weight (calculated)
42265.5 Da
IEP (calculated)
7.136
GRAVY (calculated)
-0.058
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSCCIRLH LLASVFLLLF SSFNLQGIAA ENLSKQKLTS LILQNEIVKE VNENPNAGWK AAFNDRFANA TVAEFKRLLG VIQTPKTAYL GVPIVRHDLS
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.