Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34441 | Canola | endoplasmic reticulum | 85.25 | 86.41 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 85.25 | 86.41 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 85.25 | 86.41 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 80.97 | 82.51 |
| CDX90537 | Canola | endoplasmic reticulum | 80.7 | 82.24 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 79.89 | 80.98 |
| KRH61087 | Soybean | endoplasmic reticulum | 69.44 | 70.77 |
| KRH51767 | Soybean | endoplasmic reticulum | 69.44 | 70.77 |
| PGSC0003DMT400009507 | Potato | extracellular | 68.1 | 69.97 |
| Solyc04g080960.2.1 | Tomato | extracellular | 67.29 | 69.15 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 54.69 | 68.69 |
| AT4G39090.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 67.56 | 68.48 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 67.29 | 68.39 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 66.76 | 67.66 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 65.95 | 67.4 |
| KRH17382 | Soybean | endoplasmic reticulum | 66.22 | 67.3 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 66.76 | 67.12 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 66.49 | 67.03 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 64.34 | 66.48 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 64.61 | 64.78 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 63.27 | 64.48 |
| Os02t0469600-01 | Rice | extracellular | 64.34 | 64.34 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 42.36 | 63.71 |
| Zm00001d016446_P001 | Maize | extracellular | 63.27 | 63.61 |
| EES05034 | Sorghum | endoplasmic reticulum | 63.27 | 63.61 |
| HORVU7Hr1G074340.1 | Barley | plastid | 40.75 | 62.81 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 56.84 | 62.72 |
| TraesCS2A01G273100.1 | Wheat | golgi | 63.0 | 62.01 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 60.05 | 61.04 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 61.39 | 60.74 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 61.39 | 60.74 |
| TraesCS5A01G326100.1 | Wheat | golgi | 61.39 | 60.74 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 42.63 | 60.69 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 60.86 | 60.21 |
| KRH49717 | Soybean | endoplasmic reticulum | 24.66 | 52.27 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 52.81 | 52.12 |
| AT3G54940.2 | Thale cress | endoplasmic reticulum, extracellular | 50.4 | 51.23 |
| Os04t0311400-01 | Rice | nucleus | 50.67 | 49.22 |
| AT5G60360.3 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 35.39 | 36.57 |
| AT3G45310.1 | Thale cress | extracellular, vacuole | 34.85 | 36.31 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 21.98 | 22.65 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 21.18 | 22.01 |
| AT1G02300.1 | Thale cress | extracellular | 21.18 | 20.84 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EntrezGene:827311 | ProteinID:AEE83713.1 | EMBL:AK226366 | ArrayExpress:AT4G16190 |
| EnsemblPlantsGene:AT4G16190 | RefSeq:AT4G16190 | TAIR:AT4G16190 | RefSeq:AT4G16190-TAIR-G | EnsemblPlants:AT4G16190.1 | TAIR:AT4G16190.1 |
| EMBL:AY039556 | EMBL:AY129473 | EMBL:AY136316 | EMBL:BT000733 | MEROPS:C01.A06 | ProteinID:CAB10398.1 |
| ProteinID:CAB78661.1 | GO:GO:0000323 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 |
| GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | RefSeq:NP_567489.1 |
| PFAM:PF00112 | PFAM:PF08246 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | UniProt:Q9SUL1 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000AC1D2 | SEG:seg | : |
Description
RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
Coordinates
chr4:+:9171280..9173667
Molecular Weight (calculated)
41266.1 Da
IEP (calculated)
6.968
GRAVY (calculated)
-0.252
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.