Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 8
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 100.0 | 100.0 |
| CDY34441 | Canola | endoplasmic reticulum | 98.1 | 98.1 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 86.41 | 85.25 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 82.88 | 83.33 |
| CDX90537 | Canola | endoplasmic reticulum | 81.52 | 81.97 |
| KRH61087 | Soybean | endoplasmic reticulum | 73.91 | 74.32 |
| KRH51767 | Soybean | endoplasmic reticulum | 73.1 | 73.5 |
| PGSC0003DMT400009507 | Potato | extracellular | 72.01 | 73.0 |
| Solyc04g080960.2.1 | Tomato | extracellular | 70.92 | 71.9 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 70.65 | 70.84 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 70.38 | 70.0 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.57 | 69.75 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 70.11 | 69.54 |
| KRH17382 | Soybean | endoplasmic reticulum | 69.29 | 69.48 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 64.67 | 69.39 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 55.98 | 69.36 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 68.48 | 69.04 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 68.48 | 68.48 |
| CDX90310 | Canola | vacuole | 68.48 | 68.29 |
| CDY71205 | Canola | vacuole | 68.21 | 68.21 |
| CDY15894 | Canola | endoplasmic reticulum | 66.3 | 67.4 |
| EES05034 | Sorghum | endoplasmic reticulum | 66.85 | 66.31 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 66.85 | 66.13 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 65.76 | 66.12 |
| Zm00001d016446_P001 | Maize | extracellular | 66.58 | 66.04 |
| Os02t0469600-01 | Rice | extracellular | 66.3 | 65.42 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 44.02 | 65.32 |
| CDY13816 | Canola | cytosol | 50.0 | 65.02 |
| HORVU7Hr1G074340.1 | Barley | plastid | 41.85 | 63.64 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 63.86 | 62.33 |
| TraesCS2A01G273100.1 | Wheat | golgi | 64.13 | 62.27 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 57.07 | 62.13 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 61.41 | 61.58 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 63.04 | 61.54 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 63.04 | 61.54 |
| TraesCS5A01G326100.1 | Wheat | golgi | 63.04 | 61.54 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 43.48 | 61.07 |
| CDX82031 | Canola | nucleus | 39.95 | 55.47 |
| KRH49717 | Soybean | endoplasmic reticulum | 25.54 | 53.41 |
| CDY56961 | Canola | endoplasmic reticulum | 52.17 | 52.75 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 54.08 | 52.65 |
| CDX73424 | Canola | extracellular | 51.9 | 52.47 |
| CDY42605 | Canola | plastid | 29.89 | 51.89 |
| Os04t0311400-01 | Rice | nucleus | 50.82 | 48.7 |
| CDY14798 | Canola | extracellular | 13.86 | 41.8 |
| CDY09216 | Canola | vacuole | 36.68 | 37.6 |
| CDY09213 | Canola | vacuole | 36.41 | 37.33 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 23.91 | 36.67 |
| CDX80173 | Canola | endoplasmic reticulum | 35.33 | 36.31 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.05 | 35.93 |
| CDX88753 | Canola | vacuole | 31.79 | 33.52 |
| CDX71035 | Canola | vacuole | 27.45 | 29.45 |
| CDX71045 | Canola | endoplasmic reticulum | 28.26 | 28.73 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 17.66 | 26.21 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 21.2 | 22.87 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 21.74 | 21.98 |
| CDY58223 | Canola | vacuole | 20.92 | 21.51 |
| CDY07129 | Canola | extracellular | 20.65 | 21.23 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 21.47 | 19.32 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 7.34 | 15.43 |
| CDY38163 | Canola | golgi, vacuole | 6.52 | 15.0 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078H3Z1 | UniProt:A0A078H3Z1 | MEROPS:C01.A06 | EnsemblPlants:CDY32227 |
| ProteinID:CDY32227 | ProteinID:CDY32227.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00051661001 |
| PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00025448AD | SEG:seg | : | : | : | : |
Description
BnaA01g17570DBnaA01g17570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3Z1]
Coordinates
chrLK032290:+:114706..116886
Molecular Weight (calculated)
40794.3 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.324
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRVIFFLLV AAGLLVAITG EVVEDSFDNP IIRQVVPEEN DEQLLNAEHH FSLFKSKYQK TYATQAEHDH RFRVFKANLR RARRHQLLDP SAVHGVTQFS
101: DLTPKEFRRK YLGLKRKLRL PNDAQKAPIL PTSDLPTDFD WRDKGAVTPV KNQGSCGSCW SFSATGALEG AHFLATKELV SLSEQQLVDC DHECDPEEAN
201: SCDSGCGGGL MNNAFEYTLK AGGLMKESDY PYTGHDNSGC KFDKSMIAAR VSNFSVVSAD EDQIAANLVH HGPLAIAINA MWMQTYIGGV SCPYICSKSQ
301: DHGVLLVGFG SSGYAPIRLK EKPYWIIKNS WGSTWGEDGY YKICRGRHNI CGMDTMVSTV AAVHTSTQ
101: DLTPKEFRRK YLGLKRKLRL PNDAQKAPIL PTSDLPTDFD WRDKGAVTPV KNQGSCGSCW SFSATGALEG AHFLATKELV SLSEQQLVDC DHECDPEEAN
201: SCDSGCGGGL MNNAFEYTLK AGGLMKESDY PYTGHDNSGC KFDKSMIAAR VSNFSVVSAD EDQIAANLVH HGPLAIAINA MWMQTYIGGV SCPYICSKSQ
301: DHGVLLVGFG SSGYAPIRLK EKPYWIIKNS WGSTWGEDGY YKICRGRHNI CGMDTMVSTV AAVHTSTQ
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
Arabidopsis Description
RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.