Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011877.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 98.91 | 98.91 |
| CDX90310 | Canola | vacuole | 92.1 | 91.6 |
| AT4G39090.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 91.55 | 91.3 |
| CDY71205 | Canola | vacuole | 89.92 | 89.67 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 76.57 | 81.92 |
| CDY15894 | Canola | endoplasmic reticulum | 79.84 | 80.94 |
| CDY13816 | Canola | cytosol | 58.04 | 75.27 |
| KRH29385 | Soybean | extracellular | 74.39 | 75.21 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 76.57 | 74.54 |
| KRH24406 | Soybean | extracellular | 74.11 | 74.52 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 73.3 | 73.1 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 72.48 | 72.09 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.75 | 69.57 |
| CDY34441 | Canola | endoplasmic reticulum | 69.48 | 69.29 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 65.67 | 65.85 |
| CDX90537 | Canola | endoplasmic reticulum | 65.4 | 65.57 |
| CDX82031 | Canola | nucleus | 45.78 | 63.4 |
| CDY14798 | Canola | extracellular | 19.62 | 59.02 |
| CDY42605 | Canola | plastid | 32.43 | 56.13 |
| CDX73424 | Canola | extracellular | 50.95 | 51.37 |
| CDY56961 | Canola | endoplasmic reticulum | 50.95 | 51.37 |
| CDY09216 | Canola | vacuole | 37.87 | 38.72 |
| CDY09213 | Canola | vacuole | 37.87 | 38.72 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.78 | 37.6 |
| CDX80173 | Canola | endoplasmic reticulum | 36.51 | 37.43 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 23.98 | 36.67 |
| CDX88753 | Canola | vacuole | 31.61 | 33.24 |
| CDX71035 | Canola | vacuole | 28.61 | 30.61 |
| CDX71045 | Canola | endoplasmic reticulum | 28.88 | 29.28 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 18.26 | 27.02 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 20.71 | 22.29 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 21.25 | 21.43 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 23.71 | 21.27 |
| CDY58223 | Canola | vacuole | 20.44 | 20.95 |
| CDY07129 | Canola | extracellular | 20.16 | 20.67 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 8.72 | 18.29 |
| CDY38163 | Canola | golgi, vacuole | 5.72 | 13.12 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078HTU1 | UniProt:A0A078HTU1 | EnsemblPlants:CDY41960 | ProteinID:CDY41960 |
| ProteinID:CDY41960.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00073951001 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI0004EEF63E | SEG:seg | : | : | : | : |
Description
BnaA01g05320DBnaA01g05320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTU1]
Coordinates
chrLK032511:-:85839..87408
Molecular Weight (calculated)
39904.1 Da
IEP (calculated)
6.590
GRAVY (calculated)
-0.248
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLLKLSFSL LLLSFLLVSV SSSSDGDDAV IRQVVDGAAE PNVLSSEDHF SLFKSKFGKV YASGEEHDYR FSVFKANLRR ARRHQKMDPS ARHGVTQFSD
101: LTRSEFREKH LGVKGGFKLP KDANKAPILP TENLPEDFDW RDHGAVTPVK NQGSCGSCWS FSATGALEGA NFLATGKLVS LSEQQLVDCD HECDPEEAGS
201: CDSGCNGGLM NSAFEYTLKT GGLMREEDYP YTGKDGPVCK LDKSKIVASV SNFSVISIDE DQIAANLVKN GPLAVAINAA YMQTYIGGVS CPYICTRRLN
301: HGVLLVGYGS AGYAPARFKE KPYWIIKNSW GETWGENGFY KICKGRNICG VDSLVSTVTA AVSTTAH
101: LTRSEFREKH LGVKGGFKLP KDANKAPILP TENLPEDFDW RDHGAVTPVK NQGSCGSCWS FSATGALEGA NFLATGKLVS LSEQQLVDCD HECDPEEAGS
201: CDSGCNGGLM NSAFEYTLKT GGLMREEDYP YTGKDGPVCK LDKSKIVASV SNFSVISIDE DQIAANLVKN GPLAVAINAA YMQTYIGGVS CPYICTRRLN
301: HGVLLVGYGS AGYAPARFKE KPYWIIKNSW GETWGENGFY KICKGRNICG VDSLVSTVTA AVSTTAH
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.