Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24406 | Soybean | extracellular | 91.18 | 90.68 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 77.41 | 74.54 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 75.21 | 74.39 |
| Bra011877.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 74.93 | 74.11 |
| AT4G39090.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 74.66 | 73.64 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.38 | 73.37 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 69.15 | 73.18 |
| KRH61087 | Soybean | endoplasmic reticulum | 73.55 | 72.95 |
| CDX90310 | Canola | vacuole | 74.1 | 72.9 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 73.83 | 72.63 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 71.9 | 72.3 |
| KRH51767 | Soybean | endoplasmic reticulum | 72.73 | 72.13 |
| Bra031189.1-P | Field mustard | nucleus | 61.71 | 71.34 |
| CDY71205 | Canola | vacuole | 71.9 | 70.92 |
| Bra030299.1-P | Field mustard | endoplasmic reticulum | 70.25 | 70.44 |
| CDY15894 | Canola | endoplasmic reticulum | 69.97 | 70.17 |
| CDY13816 | Canola | cytosol | 54.55 | 69.96 |
| KRH17382 | Soybean | endoplasmic reticulum | 70.52 | 69.75 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 70.25 | 68.92 |
| Bra010706.1-P | Field mustard | vacuole | 74.1 | 59.91 |
| CDX82031 | Canola | nucleus | 43.25 | 59.25 |
| CDY42605 | Canola | plastid | 31.13 | 53.3 |
| KRH49717 | Soybean | endoplasmic reticulum | 25.07 | 51.7 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 49.31 | 51.14 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 52.62 | 50.26 |
| KRH02604 | Soybean | vacuole | 37.74 | 38.81 |
| KRH13188 | Soybean | peroxisome | 9.37 | 38.2 |
| KRH12540 | Soybean | extracellular | 36.91 | 37.85 |
| KRG98609 | Soybean | mitochondrion | 29.2 | 35.57 |
| KRH37496 | Soybean | vacuole | 35.81 | 32.02 |
| KRG99207 | Soybean | cytosol, nucleus, plastid | 23.42 | 31.84 |
| KRH68369 | Soybean | nucleus | 21.49 | 21.85 |
| KRG96636 | Soybean | nucleus | 21.21 | 21.63 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 4.96 | 18.75 |
Protein Annotations
| EntrezGene:100791283 | MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EMBL:ACUP02006800 | MEROPS:C01.022 | EnsemblPlantsGene:GLYMA_11G113500 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | UniProt:I1LJ95 | EnsemblPlants:KRH29385 | ProteinID:KRH29385 |
| ProteinID:KRH29385.1 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233C3FA | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr11:-:8688238..8690421
Molecular Weight (calculated)
39718.8 Da
IEP (calculated)
6.343
GRAVY (calculated)
-0.239
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNPTLIIFF LVIFSVFFAA SADGGDDEPL IMQVVEGSGV RLGAEHHFLD FKRRFGKAYA SQEEHNYRFE VFKANMRRAR RHQSLDPSAA HGVTRFSDLT
101: ASEFRNKVLG LRGVRLPSNA NKAPILPTDN LPSDFDWRDH GAVTPVKNQG SCGSCWSFST TGALEGAHFL STGELVSLSE QQLVDCDHEC DPEEAGSCDS
201: GCNGGLMNSA FEYILKSGGV MREEDYPYSG TDRGNCKFDK AKIAASVANF SVISLDEDQI AANLVKNGPL AVAINAAYMQ TYIGGVSCPY ICSRRLDHGV
301: LLVGYGSGAY APIRMKEKPF WIIKNSWGEN WGENGYYKIC RGRNICGVDS MVSTVAAVHT TTQ
101: ASEFRNKVLG LRGVRLPSNA NKAPILPTDN LPSDFDWRDH GAVTPVKNQG SCGSCWSFST TGALEGAHFL STGELVSLSE QQLVDCDHEC DPEEAGSCDS
201: GCNGGLMNSA FEYILKSGGV MREEDYPYSG TDRGNCKFDK AKIAASVANF SVISLDEDQI AANLVKNGPL AVAINAAYMQ TYIGGVSCPY ICSRRLDHGV
301: LLVGYGSGAY APIRMKEKPF WIIKNSWGEN WGENGYYKIC RGRNICGVDS MVSTVAAVHT TTQ
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.