Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 94.29 | 86.84 |
| CDX73424 | Canola | extracellular | 67.43 | 64.84 |
| Bra007118.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 66.86 | 64.29 |
| CDY56961 | Canola | endoplasmic reticulum | 66.86 | 64.29 |
| AT3G54940.2 | Thale cress | endoplasmic reticulum, extracellular | 67.14 | 64.03 |
| VIT_13s0019g05120.t01 | Wine grape | extracellular, golgi, vacuole | 65.43 | 61.07 |
| GSMUA_Achr1P00410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 62.29 | 60.39 |
| Solyc11g008260.1.1 | Tomato | extracellular | 66.29 | 60.1 |
| PGSC0003DMT400079777 | Potato | extracellular | 65.71 | 59.59 |
| Zm00001d006364_P001 | Maize | extracellular | 57.71 | 54.89 |
| TraesCS2A01G187400.1 | Wheat | extracellular | 56.57 | 54.7 |
| EER97214 | Sorghum | endoplasmic reticulum, extracellular | 56.57 | 53.08 |
| TraesCS2B01G219900.1 | Wheat | endoplasmic reticulum, extracellular | 56.0 | 52.97 |
| TraesCS2D01G200500.1 | Wheat | extracellular | 55.43 | 52.43 |
| Os07t0480900-01 | Rice | endoplasmic reticulum, extracellular | 55.71 | 51.86 |
| KRH17382 | Soybean | endoplasmic reticulum | 52.57 | 50.14 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 56.57 | 49.75 |
| KRH51767 | Soybean | endoplasmic reticulum | 51.71 | 49.45 |
| KRH61087 | Soybean | endoplasmic reticulum | 51.71 | 49.45 |
| KRH29385 | Soybean | extracellular | 51.14 | 49.31 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 51.43 | 48.65 |
| KRH24406 | Soybean | extracellular | 50.57 | 48.49 |
| KRH49717 | Soybean | endoplasmic reticulum | 22.29 | 44.32 |
| KRH12540 | Soybean | extracellular | 34.57 | 34.18 |
| KRH02604 | Soybean | vacuole | 33.14 | 32.86 |
| KRG98609 | Soybean | mitochondrion | 27.14 | 31.88 |
| KRH13188 | Soybean | peroxisome | 8.0 | 31.46 |
| KRH37496 | Soybean | vacuole | 33.43 | 28.82 |
| KRG99207 | Soybean | cytosol, nucleus, plastid | 20.0 | 26.22 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 6.0 | 21.88 |
| KRH68369 | Soybean | nucleus | 22.0 | 21.57 |
| KRG96636 | Soybean | nucleus | 21.71 | 21.35 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A0R0EQB4 | EMBL:ACUP02012721 | EnsemblPlantsGene:GLYMA_20G183700 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlants:KRG91982 | ProteinID:KRG91982 | ProteinID:KRG91982.1 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF338 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI0006EDA2E7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:42176463..42178838
Molecular Weight (calculated)
38872.4 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.310
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKRDHSIT CLARVSLFLF ALTLSSAHES TTVHDIARKL KVGDNELLRT EKKFKVFMEN YGRSYSTREE YLRRLGIFSQ NMLRAAEHQA LDPTAVHGVT
101: QFSDLTEVEG LPENFDWREK GAVTEVKIQG RCGSCWAFST TGSIEGANFL ATGKLVSLSE QQLLDCDNKC EITEKTSCDN GCNGGLMTNA YNYLLESGGL
201: EEESSYPYTG ERGECKFDPE KITVRITNFT NIPVDENQIA AYLVKNGPLA MGVNAIFMQT YIGGVSCPLI CSKKRLNHGV LLVGYGAKGF SILRLGNKPY
301: WIIKNSWGKK WGEDGYYKLC RGHGMCGINT MVSAAMVAQP QTPTKNYASY
101: QFSDLTEVEG LPENFDWREK GAVTEVKIQG RCGSCWAFST TGSIEGANFL ATGKLVSLSE QQLLDCDNKC EITEKTSCDN GCNGGLMTNA YNYLLESGGL
201: EEESSYPYTG ERGECKFDPE KITVRITNFT NIPVDENQIA AYLVKNGPLA MGVNAIFMQT YIGGVSCPLI CSKKRLNHGV LLVGYGAKGF SILRLGNKPY
301: WIIKNSWGKK WGEDGYYKLC RGHGMCGINT MVSAAMVAQP QTPTKNYASY
001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
Arabidopsis Description
RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.