Factsheet for VIT_13s0019g05120.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	65.07	66.48
Solyc11g008260.1.1	Tomato	extracellular	68.0	66.06
PGSC0003DMT400079777	Potato	extracellular	67.47	65.54
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	61.07	65.43
CDY56961	Canola	endoplasmic reticulum	63.47	65.38
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	62.93	65.37
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	63.2	65.11
CDX73424	Canola	extracellular	62.93	64.84
KRH34798	Soybean	endoplasmic reticulum, golgi	65.07	64.21
TraesCS2A01G187400.1	Wheat	extracellular	57.33	59.39
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	57.6	58.38
TraesCS2D01G200500.1	Wheat	extracellular	57.07	57.84
Zm00001d006364_P001	Maize	extracellular	56.53	57.61
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	57.6	57.45
EER97214	Sorghum	endoplasmic reticulum, extracellular	57.07	57.37
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	57.6	54.27
VIT_18s0001g13390.t01	Wine grape	endoplasmic reticulum	50.93	51.9
VIT_18s0001g13380.t01	Wine grape	extracellular	50.4	51.78
VIT_04s0023g02450.t01	Wine grape	vacuole	49.07	50.14
VIT_18s0001g13400.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	49.6	50.13
VIT_03s0038g00280.t01	Wine grape	endoplasmic reticulum	48.53	48.28
VIT_08s0007g05150.t01	Wine grape	cytosol	7.73	36.25
VIT_11s0016g01070.t01	Wine grape	extracellular	31.73	32.87
VIT_05s0049g01580.t01	Wine grape	cytosol, mitochondrion, nucleus	7.47	32.56
VIT_16s0098g00930.t01	Wine grape	cytosol	7.47	32.56
VIT_15s0024g01100.t01	Wine grape	endoplasmic reticulum	11.2	21.43
VIT_07s0005g02820.t01	Wine grape	vacuole	21.33	20.41

Protein Annotations

EntrezGene:100244387	wikigene:100244387	MapMan:19.4.1.1	Gene3D:3.90.70.10	EMBL:AM424734	MEROPS:C01.A05
ProteinID:CAN64491	ProteinID:CAN64491.1	ProteinID:CCB56137	ProteinID:CCB56137.1	UniProt:F6HNB8	EMBL:FN595998
GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EntrezGene:LOC100244387	wikigene:LOC100244387	PFAM:PF00112
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM
UniParc:UPI000198480E	ArrayExpress:VIT_13s0019g05120	EnsemblPlantsGene:VIT_13s0019g05120	EnsemblPlants:VIT_13s0019g05120.t01	unigene:Vvi.20164	RefSeq:XP_002266821
RefSeq:XP_002266821.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:+:6881405..6883063

Molecular Weight (calculated)

41100.3 Da

IEP (calculated)

6.662

GRAVY (calculated)

-0.153

Length

375 amino acids

Sequence
(BLAST)

001: MGGGLTCALG VAALLTCALA ASAISLHEHD TPWDPNIVQV TDGHSHRKFG VDGVLGTEKE FRMFMEKYGK EYSSREEYVH RLGIFAKNMV RAAEHQALDP
101: TALHGVTPFS DLSEEEFERM FTGVVGRPHM KGGVAETAAA LEVDGLPESF DWREKGAVTE VKMQGTCGSC WAFSTTGAVE GAHFISTKKL LTLSEQQLVD
201: CDHMCDIRDK TACDSGCEGG LMTNAYKYLI EAGGLEEESS YPYTGKHGEC KFKPDRVAVR VVNFTEVPIN ENQIAANLVC HGPLAVGLNA IFMQTYIGGV
301: SCPLICPKRW INHGVLLVGY GAKGYSILRF GYKPYWIIKN SWGKRWGEHG YYRLCRGHGM CGMNTMVSAV VTQTS

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.