Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007118.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 98.08 | 98.08 |
| CDY56961 | Canola | endoplasmic reticulum | 98.08 | 98.08 |
| AT3G54940.2 | Thale cress | endoplasmic reticulum, extracellular | 84.07 | 83.38 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 64.84 | 67.43 |
| PGSC0003DMT400079777 | Potato | extracellular | 69.23 | 65.28 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 68.13 | 65.26 |
| Solyc11g008260.1.1 | Tomato | extracellular | 68.13 | 64.25 |
| VIT_13s0019g05120.t01 | Wine grape | extracellular, golgi, vacuole | 64.84 | 62.93 |
| GSMUA_Achr1P00410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 59.89 | 60.39 |
| TraesCS2A01G187400.1 | Wheat | extracellular | 54.95 | 55.25 |
| TraesCS2B01G219900.1 | Wheat | endoplasmic reticulum, extracellular | 55.22 | 54.32 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 51.1 | 54.23 |
| CDY13816 | Canola | cytosol | 42.03 | 54.06 |
| TraesCS2D01G200500.1 | Wheat | extracellular | 54.67 | 53.78 |
| Zm00001d006364_P001 | Maize | extracellular | 53.57 | 52.99 |
| EER97214 | Sorghum | endoplasmic reticulum, extracellular | 53.85 | 52.55 |
| CDY15894 | Canola | endoplasmic reticulum | 52.2 | 52.49 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.47 | 51.9 |
| Os07t0480900-01 | Rice | endoplasmic reticulum, extracellular | 53.57 | 51.86 |
| CDY34441 | Canola | endoplasmic reticulum | 52.2 | 51.63 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.37 | 50.95 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 50.82 | 50.55 |
| CDX90537 | Canola | endoplasmic reticulum | 50.82 | 50.55 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 55.22 | 50.5 |
| CDX90310 | Canola | vacuole | 51.1 | 50.41 |
| CDY71205 | Canola | vacuole | 50.82 | 50.27 |
| CDX82031 | Canola | nucleus | 33.52 | 46.04 |
| CDY42605 | Canola | plastid | 21.98 | 37.74 |
| CDX80173 | Canola | endoplasmic reticulum | 35.44 | 36.03 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 23.63 | 35.83 |
| CDY09216 | Canola | vacuole | 35.16 | 35.65 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.89 | 35.38 |
| CDY09213 | Canola | vacuole | 34.62 | 35.1 |
| CDX88753 | Canola | vacuole | 31.32 | 32.66 |
| CDX71035 | Canola | vacuole | 28.85 | 30.61 |
| CDX71045 | Canola | endoplasmic reticulum | 28.02 | 28.18 |
| CDY14798 | Canola | extracellular | 8.79 | 26.23 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 17.03 | 25.0 |
| CDY58223 | Canola | vacuole | 21.7 | 22.07 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 20.6 | 21.99 |
| CDY07129 | Canola | extracellular | 21.43 | 21.79 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 21.43 | 21.43 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 23.08 | 20.54 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 7.97 | 16.57 |
| CDY38163 | Canola | golgi, vacuole | 6.87 | 15.62 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078CB34 | MEROPS:C01.A05 | EnsemblPlants:CDX73424 | ProteinID:CDX73424 |
| ProteinID:CDX73424.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00108921001 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF365 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI0004EE70E0 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g25790D
Coordinates
chrLK031799:-:296087..297942
Molecular Weight (calculated)
40020.1 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.245
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAKTLALVL TCTAIFCHVA VSLEDLTIRQ VTEDRLPNLL GTHTERKFRV FMSDYGKSYS TREEYIHRLG IFAKNVLKAA EHQMMDPTAV HGVTQFSDLT
101: EDEFKRMYNG VVDVDRGHGG VVGAEAPKLE IKGLPKDFDW REKGAVTEVK DQGACGSCWA FSTTGAVEGA NFVSTGKLVS LSEQQLVDCD KACDPKDKKA
201: CDNGCGGGLM TNAYEYLEKA GGLEEEKSYP YTGKRGHCKF DPKKVAVKIV NFTNIPLDED QITARLVQHG PLSVGINAVF MQTYIGGVSC PLICSKKRLN
301: HGVLLVGYGS KGFSILRLSN KPYWIIKNSW GKKWGDNGYY KLCRGHDMCG INSMASAVLT QVSS
101: EDEFKRMYNG VVDVDRGHGG VVGAEAPKLE IKGLPKDFDW REKGAVTEVK DQGACGSCWA FSTTGAVEGA NFVSTGKLVS LSEQQLVDCD KACDPKDKKA
201: CDNGCGGGLM TNAYEYLEKA GGLEEEKSYP YTGKRGHCKF DPKKVAVKIV NFTNIPLDED QITARLVQHG PLSVGINAVF MQTYIGGVSC PLICSKKRLN
301: HGVLLVGYGS KGFSILRLSN KPYWIIKNSW GKKWGDNGYY KLCRGHDMCG INSMASAVLT QVSS
001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
Arabidopsis Description
RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.