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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G187400.1 Wheat extracellular 78.72 81.77
TraesCS2B01G219900.1 Wheat endoplasmic reticulum, extracellular 78.46 79.73
TraesCS2D01G200500.1 Wheat extracellular 76.6 77.84
Zm00001d006364_P001 Maize extracellular 75.8 77.45
EER97214 Sorghum endoplasmic reticulum, extracellular 76.06 76.68
HORVU2Hr1G036930.1 Barley endoplasmic reticulum, extracellular, vacuole 79.26 74.87
GSMUA_Achr1P00410_001 Banana endoplasmic reticulum, extracellular, vacuole 61.97 64.54
VIT_13s0019g05120.t01 Wine grape extracellular, golgi, vacuole 57.45 57.6
AT3G54940.2 Thale cress endoplasmic reticulum, extracellular 54.79 56.13
KRG91982 Soybean endoplasmic reticulum, golgi, vacuole 51.86 55.71
Solyc11g008260.1.1 Tomato extracellular 56.91 55.44
PGSC0003DMT400079777 Potato extracellular 56.38 54.92
Bra007118.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 52.39 54.12
CDY56961 Canola endoplasmic reticulum 52.13 53.85
CDX73424 Canola extracellular 51.86 53.57
KRH34798 Soybean endoplasmic reticulum, golgi 53.99 53.42
Os02t0469600-01 Rice extracellular 51.33 51.74
Os04t0311400-01 Rice nucleus 41.49 40.62
Os09t0442300-01 Rice extracellular 34.31 34.77
Os05t0310500-02 Rice extracellular 6.12 11.92
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10EntrezGene:4343231EMBL:AK063422ProteinID:BAC45132.1ProteinID:BAF21553.1
ProteinID:BAT01481.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603EnsemblPlantsGene:Os07g0480900EnsemblPlants:Os07t0480900-01
PFAM:PF00112PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF338InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29UniProt:Q8GVR2SMART:SM00645SMART:SM00848
SUPFAM:SSF54001SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000AE07DRefSeq:XP_015645418.1SEG:seg
Description
endosperm-specific gene 106Similar to Cysteine protease (Fragment). (Os07t0480900-01)
Coordinates
chr7:+:17496502..17498002
Molecular Weight (calculated)
39870.3 Da
IEP (calculated)
6.391
GRAVY (calculated)
-0.067
Length
376 amino acids
Sequence
(BLAST)
001: MAAAPARLVV LVLVAVVVVV GGDGDAGVIR QVTDGGYWPP GLLPEAQFAA FVRRHGREYS GPEEYARRLR VFAANLARAA AHQALDPTAR HGVTPFSDLT
101: REEFEARLTG LAADVGDDVR RRPMPSAAPA TEEEVSGLPA SFDWRDRGAV TDVKMQGACG SCWAFSTTGA VEGANFLATG NLLDLSEQQL VDCDHTCDAE
201: KKTECDSGCG GGLMTNAYAY LMSSGGLMEQ SAYPYTGAQG TCRFDANRVA VRVANFTVVA PPGGNDGDGD AQMRAALVRH GPLAVGLNAA YMQTYVGGVS
301: CPLVCPRAWV NHGVLLVGYG ERGFAALRLG HRPYWIIKNS WGKAWGEQGY YRLCRGRNVC GVDTMVSAVA VAPPPP
Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)
001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
Arabidopsis Description
RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.