Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97214 | Sorghum | endoplasmic reticulum, extracellular | 91.3 | 90.08 |
| TraesCS2A01G187400.1 | Wheat | extracellular | 80.98 | 82.32 |
| TraesCS2B01G219900.1 | Wheat | endoplasmic reticulum, extracellular | 81.52 | 81.08 |
| TraesCS2D01G200500.1 | Wheat | extracellular | 80.43 | 80.0 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 82.07 | 75.88 |
| Os07t0480900-01 | Rice | endoplasmic reticulum, extracellular | 77.45 | 75.8 |
| GSMUA_Achr1P00410_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 65.49 | 66.76 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 54.89 | 57.71 |
| VIT_13s0019g05120.t01 | Wine grape | extracellular, golgi, vacuole | 57.61 | 56.53 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 57.34 | 55.53 |
| AT3G54940.2 | Thale cress | endoplasmic reticulum, extracellular | 54.89 | 55.04 |
| Solyc11g008260.1.1 | Tomato | extracellular | 56.79 | 54.15 |
| Bra007118.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 53.26 | 53.85 |
| CDY56961 | Canola | endoplasmic reticulum | 53.26 | 53.85 |
| CDX73424 | Canola | extracellular | 52.99 | 53.57 |
| PGSC0003DMT400079777 | Potato | extracellular | 55.71 | 53.11 |
| Zm00001d016446_P001 | Maize | extracellular | 52.45 | 52.02 |
| Zm00001d020327_P001 | Maize | cytosol | 19.84 | 48.67 |
| Zm00001d022297_P001 | Maize | cytosol, extracellular, nucleus | 8.97 | 45.21 |
| Zm00001d005828_P003 | Maize | cytosol, nucleus, plastid | 29.62 | 36.21 |
| Zm00001d020636_P001 | Maize | extracellular | 33.7 | 34.44 |
| Zm00001d017233_P001 | Maize | cytosol | 24.46 | 29.41 |
| Zm00001d021615_P002 | Maize | extracellular, plasma membrane, vacuole | 18.75 | 18.8 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A1D6EVL1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 |
| ProteinID:ONM23610.1 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF338 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI000842728D | EnsemblPlantsGene:Zm00001d006364 | EnsemblPlants:Zm00001d006364_P001 | EnsemblPlants:Zm00001d006364_T001 |
| SEG:seg | : | : | : | : | : |
Description
Probable cysteine protease RD19D
Coordinates
chr2:-:205730168..205731628
Molecular Weight (calculated)
38992.7 Da
IEP (calculated)
8.599
GRAVY (calculated)
0.023
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQLAVLLL LLPLLAGASA DDKFIRQVTT QGTRAGAGPG LLPEAQFAAF VRRHGRRYSG PKEYARRLRV FAANLARAAA HQALDPTARH GVTPFSDLTR
101: EEFEARLTGL RAGGDVQRLM SGVPAAPPAS KEEVARLPAS FDWRDKGAVT GVKTQGACGS CWAFSTTGAV EGANFLATGE LVDLSEQQLV DCDHTCSAVA
201: QNECNNGCAG GLMTNAYSYL MESGGLMEQS AYPYTGAAGP CRFDPTQVAV RVANFTAVPA GDEAQIRAAL VRRGPLAVGL NAAFMQTYVG GVSCPLICPR
301: AWVNHGVLLV GYGARGFAAL RLGYRPYWII KNSWGKQWGE QGYYRLCRGS NVCGVDSMVS AVAVAPAL
101: EEFEARLTGL RAGGDVQRLM SGVPAAPPAS KEEVARLPAS FDWRDKGAVT GVKTQGACGS CWAFSTTGAV EGANFLATGE LVDLSEQQLV DCDHTCSAVA
201: QNECNNGCAG GLMTNAYSYL MESGGLMEQS AYPYTGAAGP CRFDPTQVAV RVANFTAVPA GDEAQIRAAL VRRGPLAVGL NAAFMQTYVG GVSCPLICPR
301: AWVNHGVLLV GYGARGFAAL RLGYRPYWII KNSWGKQWGE QGYYRLCRGS NVCGVDSMVS AVAVAPAL
001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS
Arabidopsis Description
RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.