Factsheet for HORVU2Hr1G036930.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

plastid 2
vacuole 4
endoplasmic reticulum 2
extracellular 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G187400.1	Wheat	extracellular	87.44	96.13
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	88.94	95.68
TraesCS2D01G200500.1	Wheat	extracellular	87.19	93.78
Zm00001d006364_P001	Maize	extracellular	75.88	82.07
EER97214	Sorghum	endoplasmic reticulum, extracellular	74.37	79.36
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	74.87	79.26
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	61.31	67.59
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	54.27	57.6
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	52.51	56.95
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	49.75	56.57
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	51.01	55.77
Solyc11g008260.1.1	Tomato	extracellular	54.02	55.7
CDY56961	Canola	endoplasmic reticulum	50.75	55.49
CDX73424	Canola	extracellular	50.5	55.22
PGSC0003DMT400079777	Potato	extracellular	53.27	54.92
KRH34798	Soybean	endoplasmic reticulum, golgi	51.76	54.21
HORVU7Hr1G069280.1	Barley	nucleus	33.17	53.23
HORVU5Hr1G082810.1	Barley	vacuole	49.5	52.25
HORVU7Hr1G074340.1	Barley	plastid	31.16	51.24
HORVU4Hr1G082210.1	Barley	cytosol, mitochondrion, nucleus, plastid	33.17	50.38
HORVU2Hr1G066680.1	Barley	endoplasmic reticulum	41.71	43.92
HORVU5Hr1G061770.1	Barley	extracellular, golgi, vacuole	32.91	36.19
HORVU4Hr1G010300.11	Barley	extracellular	20.6	23.16
HORVU4Hr1G010360.3	Barley	vacuole	18.34	18.16
HORVU4Hr1G010390.14	Barley	vacuole	19.6	14.89

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G036930
EnsemblPlants:HORVU2Hr1G036930.1	UniProt:M0XPC4	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF338	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645
SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI000294EA2A	SEG:seg	:

Description

No Description!

Coordinates

chrchr2H:+:167100193..167101478

Molecular Weight (calculated)

42136.3 Da

IEP (calculated)

7.656

GRAVY (calculated)

0.007

Length

398 amino acids

Sequence
(BLAST)

001: MSATSQYSSS PIFDEASCVR TGQGLHTYGT MAARLVSLLL LLALVNVAHH AGVSAEDVIR QVTDSGHGAG HPGLLPEAQF AAFVRRHGKE YSGPEEYARR
101: LRVFAANVAR AAAHQALDPG ARHGVTPFSD LTREEFEARL TGLVGAGDVL RSARRMPAAA PATEEEVAAL PASFDWRDKG AVTDVKMQGV CGSCWAFSTT
201: GAVEGANFVA TGKLLDLSEQ QLVDCDHTCD AVAKTECNSG CSGGLMTNAY RYLMSSGGLM EQAAYPYTGA QGPCRFDRGK VAVRVANFTA VPLDEDQMRA
301: ALVRGGPLAV GLNAAFMQTY VGGVSCPLIC PRAMVNHGVL LVGYGARGFS ALRLGYRPYW LIKNSWGAQW GEGGYYKLCR GRNVCGVDSM VSAVAVAP

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.