Factsheet for TraesCS2B01G219900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G187400.1	Wheat	extracellular	95.95	98.07
TraesCS2D01G200500.1	Wheat	extracellular	95.95	95.95
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	95.68	88.94
Zm00001d006364_P001	Maize	extracellular	81.08	81.52
EER97214	Sorghum	endoplasmic reticulum, extracellular	79.73	79.09
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	79.73	78.46
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	65.14	66.76
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	58.38	57.6
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	56.49	56.95
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	52.97	56.0
Solyc11g008260.1.1	Tomato	extracellular	58.38	55.96
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	54.86	55.77
CDY56961	Canola	endoplasmic reticulum	54.59	55.49
CDX73424	Canola	extracellular	54.32	55.22
PGSC0003DMT400079777	Potato	extracellular	57.57	55.18
KRH34798	Soybean	endoplasmic reticulum, golgi	55.41	53.95
TraesCS5B01G326500.1	Wheat	extracellular	53.78	52.79
TraesCS5B01G208100.1	Wheat	vacuole	34.32	35.18
TraesCS4B01G062400.1	Wheat	extracellular	21.08	22.16
TraesCS4B01G062500.1	Wheat	extracellular	20.0	21.57
TraesCS4B01G062600.1	Wheat	vacuole	19.19	19.72

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF338
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2B01G219900
EnsemblPlants:TraesCS2B01G219900.1	TIGR:cd02248	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:+:210457038..210458243

Molecular Weight (calculated)

39080.9 Da

IEP (calculated)

8.344

GRAVY (calculated)

0.033

Length

370 amino acids

Sequence
(BLAST)

001: MAARLVVLLL LALVNVAPPR RHAGVSAEDV IRQVTDGGHG AGRPGLLPEA QFAAFVRRHG KEYSGPEEYA RRLRVFAANV ARAAAHQALD PGARHGVTPF
101: SDLTREEFEA RLTGLVGAGD VLRSVRGMPA AAPATEEEVA ALPASFDWRD KGAVTDVKMQ GVCGSCWAFS TTGAVEGANF VATGKLLNLS EQQLVDCDHT
201: CDAVAKSECN SGCSGGLMTN AYKYLMSSGG LMEQAAYPST GAQGPCRFDR SKVAVRVANF TAVPLDEDQM RAALVRGGPL AVGLNAAFMQ TYVGGVSCPL
301: ICPRALVNHG VLLVGYGARG FSALRLGYRP YWLIKNSWGT QWGEGGYYKL CRGRNVCGVD SMVSAVAVAP

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.