Factsheet for Bra007118.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56961	Canola	endoplasmic reticulum	98.9	98.9
CDX73424	Canola	extracellular	98.08	98.08
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	85.16	84.47
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	64.29	66.86
PGSC0003DMT400079777	Potato	extracellular	69.51	65.54
KRH34798	Soybean	endoplasmic reticulum, golgi	67.58	64.74
Solyc11g008260.1.1	Tomato	extracellular	68.41	64.51
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	65.11	63.2
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	60.44	60.94
Bra031189.1-P	Field mustard	nucleus	48.9	56.69
TraesCS2A01G187400.1	Wheat	extracellular	55.49	55.8
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	55.77	54.86
TraesCS2D01G200500.1	Wheat	extracellular	55.22	54.32
EER97214	Sorghum	endoplasmic reticulum, extracellular	54.67	53.35
Zm00001d006364_P001	Maize	extracellular	53.85	53.26
Bra030299.1-P	Field mustard	endoplasmic reticulum	52.47	52.76
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	54.12	52.39
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.75	52.17
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	55.77	51.01
Bra012733.1-P	Field mustard	endoplasmic reticulum	51.1	50.54
Bra011877.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.82	50.41
Bra010706.1-P	Field mustard	vacuole	51.37	41.65
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	35.99	36.49
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	35.71	36.21
Bra036565.1-P	Field mustard	extracellular	20.88	34.55
Bra036321.1-P	Field mustard	vacuole	22.25	22.63
Bra030498.1-P	Field mustard	vacuole	21.98	22.41
Bra006666.1-P	Field mustard	vacuole	23.35	18.97
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	17.31	18.31
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	8.79	13.91

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra007118	EnsemblPlants:Bra007118.1	EnsemblPlants:Bra007118.1-P	MEROPS:C01.A05
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4CSC6	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF365
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI00025429A7
SEG:seg	:	:	:	:	:

Description

AT3G54940 (E=6e-171) | cysteine-type endopeptidase/ cysteine-type peptidase

Coordinates

chrA09:+:27418176..27419879

Molecular Weight (calculated)

39993.0 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.237

Length

364 amino acids

Sequence
(BLAST)

001: MVAKTLALVL TCTAIFCHVA VSLEDLTIRQ VTEDRLPNLL GTHTERKFRV FMSDYGKSYS TREEYIHRLG IFAKNVLKAA EHQMMDPTAV HGVTQFSDLT
101: EEEFKRMYTG VVDVDRGHGG VVGAEAPQLD IKGLPKDFDW REKGAVTEVK DQGACGSCWA FSTTGAVEGA NFVSTGKLVS LSEQQLVDCD KACDPKDKKA
201: CDNGCGGGLM TNAYEYLEKA GGLEEEKSYP YTGKRGHCKF DPKKVAVKVL NFTNIPLDED QITARLVQHG PLSVGINAVF MQTYIGGVSC PLICSKKRLN
301: HGVLLVGYGS KGFSILRLSN KPYWIIKNSW GKKWGDNGYY KLCRGHDMCG INSMASAVLT QVSS

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.