Factsheet for Bra031189.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13816	Canola	cytosol	86.31	95.76
CDX82031	Canola	nucleus	65.92	78.11
Bra030299.1-P	Field mustard	endoplasmic reticulum	80.25	69.61
AT2G21430.1	Thale cress	endoplasmic reticulum	79.94	69.53
Bra011877.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	78.03	66.76
KRH29385	Soybean	extracellular	71.34	61.71
KRH24406	Soybean	extracellular	71.02	61.1
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	69.43	59.08
PGSC0003DMT400079506	Potato	endoplasmic reticulum, extracellular, vacuole	69.11	58.97
VIT_03s0038g00280.t01	Wine grape	endoplasmic reticulum	69.75	58.09
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	67.83	57.88
Bra012733.1-P	Field mustard	endoplasmic reticulum	62.74	53.53
Bra010706.1-P	Field mustard	vacuole	76.43	53.45
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	56.69	48.9
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.08	35.93
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	40.76	35.65
Bra036565.1-P	Field mustard	extracellular	22.93	32.73
Bra030498.1-P	Field mustard	vacuole	24.84	21.85
Bra036321.1-P	Field mustard	vacuole	23.25	20.39
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	21.02	19.19
Bra006666.1-P	Field mustard	vacuole	25.16	17.63
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	7.96	10.87

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra031189	EnsemblPlants:Bra031189.1	EnsemblPlants:Bra031189.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787
GO:GO:0019538	UniProt:M4EQW6	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00639
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
UniParc:UPI0002542FDC	SEG:seg	:	:	:	:

Description

AT2G21430 (E=6e-143) | cysteine proteinase A494, putative / thiol protease, putative

Coordinates

chrA09:+:32078305..32080837

Molecular Weight (calculated)

34987.2 Da

IEP (calculated)

7.299

GRAVY (calculated)

-0.398

Length

314 amino acids

Sequence
(BLAST)

001: MSWEDHFALF KRKYGKVYNS HEEHQHRFWI FRSNFMRATR HQRMDPFARH GVTQFSDLTH SEFRRKHLGV KGAYTFSQHA DQAPILDTKN LPGDFDWRDR
101: GAVTPVKNQG ACGSSWSFST TGALEGAHFL ATGKLVSLSE QQLVDCDHQC DPEVEGLCDS GCNGGLMNIA SEYTFETGGL MREEDYPYTG TTDGDGICKL
201: DKSKIVASVF NFSVVSSNED QIAANLVKNG PLAVAINSAY MKTYVGGVLC PYMCSRSLNH GVLLVGYGSE GSRFKEKPYW IIKNSWGETW GESGFFKLCK
301: GRNICGFGSL VSTV

Best Arabidopsis Sequence Match ( AT2G21430.1 )
(BLAST)

001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S

Arabidopsis Description

RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.