Factsheet for AT2G21430.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
endoplasmic reticulum 7
plasma membrane 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99593	Canola	endoplasmic reticulum, golgi	82.55	86.88
Bra030299.1-P	Field mustard	endoplasmic reticulum	86.98	86.74
CDY15894	Canola	endoplasmic reticulum	86.7	86.46
AT4G39090.1	Thale cress	endoplasmic reticulum, golgi, vacuole	82.55	80.98
Bra031189.1-P	Field mustard	nucleus	69.53	79.94
CDY13816	Canola	cytosol	60.39	77.03
KRH29385	Soybean	extracellular	72.3	71.9
PGSC0003DMT400079506	Potato	endoplasmic reticulum, extracellular, vacuole	72.58	71.2
KRH24406	Soybean	extracellular	71.75	70.96
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	72.3	70.73
VIT_03s0038g00280.t01	Wine grape	endoplasmic reticulum	72.85	69.76
CDX82031	Canola	nucleus	47.37	64.53
AT4G16190.1	Thale cress	endoplasmic reticulum, extracellular	66.48	64.34
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	53.19	52.32
AT3G45310.1	Thale cress	extracellular, vacuole	38.23	38.55
AT5G60360.3	Thale cress	endoplasmic reticulum, extracellular, vacuole	38.23	38.23
AT1G02305.1	Thale cress	extracellular, vacuole	22.99	22.93
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	21.88	22.01
AT1G02300.1	Thale cress	extracellular	21.33	20.32

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EntrezGene:816682	UniProt:A0A178VSI2	ProteinID:AAD23687.1	ProteinID:AEC07177.1
EMBL:AK175856	ArrayExpress:AT2G21430	EnsemblPlantsGene:AT2G21430	RefSeq:AT2G21430	TAIR:AT2G21430	RefSeq:AT2G21430-TAIR-G
EnsemblPlants:AT2G21430.1	TAIR:AT2G21430.1	EMBL:BT029231	MEROPS:C01.A04	GO:GO:0000323	GO:GO:0003674
GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	RefSeq:NP_565512.1	ProteinID:OAP08796.1	UniProt:P43295	PFAM:PF00112
PFAM:PF08246	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001078	PO:PO:0001185
PO:PO:0004507	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00705	ScanProsite:PS00139
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645
SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI000012503A	EMBL:X74359	SEG:seg

Description

RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]

Coordinates

chr2:-:9171872..9173490

Molecular Weight (calculated)

39821.3 Da

IEP (calculated)

7.411

GRAVY (calculated)

-0.252

Length

361 amino acids

Sequence
(BLAST)

001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.