Factsheet for Solyc01g110110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079506	Potato	endoplasmic reticulum, extracellular, vacuole	96.48	96.74
VIT_03s0038g00280.t01	Wine grape	endoplasmic reticulum	77.24	75.6
KRH29385	Soybean	extracellular	72.63	73.83
AT4G39090.1	Thale cress	endoplasmic reticulum, golgi, vacuole	73.44	73.64
CDY71205	Canola	vacuole	72.9	73.1
CDX90310	Canola	vacuole	72.9	72.9
CDX99593	Canola	endoplasmic reticulum, golgi	67.75	72.89
Bra011877.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	72.09	72.48
CDY41960	Canola	endoplasmic reticulum, extracellular, vacuole	72.09	72.48
KRH24406	Soybean	extracellular	71.54	72.33
AT2G21430.1	Thale cress	endoplasmic reticulum	70.73	72.3
Bra030299.1-P	Field mustard	endoplasmic reticulum	69.92	71.27
CDY15894	Canola	endoplasmic reticulum	69.65	70.99
Bra031189.1-P	Field mustard	nucleus	59.08	69.43
Solyc04g080960.2.1	Tomato	extracellular	68.29	69.42
CDY13816	Canola	cytosol	52.3	68.2
Bra010706.1-P	Field mustard	vacuole	72.9	59.91
CDX82031	Canola	nucleus	41.19	57.36
CDY42605	Canola	plastid	31.17	54.25
Solyc11g008260.1.1	Tomato	extracellular	53.93	51.55
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	27.37	38.85
Solyc07g041900.2.1	Tomato	extracellular	37.4	38.76
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	21.41	22.32
Solyc02g069090.2.1	Tomato	extracellular	20.87	21.88
Solyc02g069100.2.1	Tomato	plastid	20.87	21.75

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	MEROPS:C01.022	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197
GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603
UniProt:K4B3M4	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS
InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848
SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g110110.2	EnsemblPlants:Solyc01g110110.2.1	TMHMM:TMhelix	UniParc:UPI0002768DA0
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:96889456..96892373

Molecular Weight (calculated)

40796.2 Da

IEP (calculated)

6.370

GRAVY (calculated)

-0.270

Length

369 amino acids

Sequence
(BLAST)

001: MAHRFSLVFV LSILLTTSFL LAVNGEIKGG DDDILIRQVV GDEDHHMLNA EHHFTLFKKR FGKTYASDEE HHYRFSVFKA NLRRAMRHQK LDPSAVHGVT
101: QFSDMTPDEF SQKFLGVNRR LRFPSDANKA PILPTEDLPS DFDWREHGAV TPVKNQGSCG SCWSFSTTGA LEGANFLATG KLVSLSEQQL VDCDHECDPE
201: EKDSCDSGCS GGLMNSAFEY TLKAGGLMRE EDYPYTGTDK ATCKFDNTKV AAKVANFSVV SLDEEQIAAN LVKNGPLAVA INAVFMQTYV GGVSCPYICS
301: KQLDHGVLLV GYGTGFSPIR MKEKPYWIIK NSWGEKWGES GYYKICRGRN VCGVDSMVST VAAVSTSSW

Best Arabidopsis Sequence Match ( AT4G39090.1 )
(BLAST)

001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH

Arabidopsis Description

RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.