Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29385 | Soybean | extracellular | 90.68 | 91.18 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 74.52 | 74.11 |
| Bra011877.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 74.25 | 73.84 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 68.77 | 73.18 |
| CDX90310 | Canola | vacuole | 73.97 | 73.17 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 75.34 | 72.94 |
| AT4G39090.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 73.15 | 72.55 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 72.88 | 72.28 |
| KRH61087 | Soybean | endoplasmic reticulum | 72.05 | 71.86 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 70.96 | 71.75 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 72.33 | 71.54 |
| KRH51767 | Soybean | endoplasmic reticulum | 71.23 | 71.04 |
| Bra031189.1-P | Field mustard | nucleus | 61.1 | 71.02 |
| Bra030299.1-P | Field mustard | endoplasmic reticulum | 70.14 | 70.72 |
| CDY71205 | Canola | vacuole | 71.23 | 70.65 |
| CDY15894 | Canola | endoplasmic reticulum | 69.86 | 70.44 |
| KRH17382 | Soybean | endoplasmic reticulum | 70.14 | 69.75 |
| CDY13816 | Canola | cytosol | 53.97 | 69.61 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 70.41 | 69.46 |
| Bra010706.1-P | Field mustard | vacuole | 73.97 | 60.13 |
| CDX82031 | Canola | nucleus | 42.74 | 58.87 |
| CDY42605 | Canola | plastid | 31.51 | 54.25 |
| KRH49717 | Soybean | endoplasmic reticulum | 24.66 | 51.14 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 48.49 | 50.57 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 52.33 | 50.26 |
| KRH13188 | Soybean | peroxisome | 9.32 | 38.2 |
| KRH12540 | Soybean | extracellular | 36.99 | 38.14 |
| KRH02604 | Soybean | vacuole | 36.71 | 37.96 |
| KRG98609 | Soybean | mitochondrion | 28.49 | 34.9 |
| KRH37496 | Soybean | vacuole | 36.16 | 32.51 |
| KRG99207 | Soybean | cytosol, nucleus, plastid | 22.74 | 31.09 |
| KRH68369 | Soybean | nucleus | 21.37 | 21.85 |
| KRG96636 | Soybean | nucleus | 21.1 | 21.63 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 4.93 | 18.75 |
Protein Annotations
| EntrezGene:100812198 | MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EMBL:ACUP02007175 | ProteinID:BAX25281.1 | MEROPS:C01.022 |
| EnsemblPlantsGene:GLYMA_12G039400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | UniProt:I1LPZ4 | EnsemblPlants:KRH24406 |
| ProteinID:KRH24406 | ProteinID:KRH24406.1 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI000233CED1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr12:-:2858971..2861833
Molecular Weight (calculated)
39840.9 Da
IEP (calculated)
5.999
GRAVY (calculated)
-0.278
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNPTLFLLL VAFSLVFAAV SASSDGGNEE PLIMQVVDGG DVRLGAEHHF LEFKRRFGKA YDSEDEHDYR YKVFKANMRR ARRHQSLDPS AAHGVTRFSD
101: LTPSEFRNKV LGLRGVRLPL DANKAPILPT DNLPSDFDWR DHGAVTPVKN QGSCGSCWSF STTGALEGAH FLSTGELVSL SEQQLVDCDH ECDPEEPGSC
201: DSGCNGGLMN SAFEYILKSG GVMREEDYPY SGADSGTCKF DKTKIAASVA NFSVVSLDED QIAANLVKNG PLAVAINAAY MQTYIGGVSC PYVCSRRLNH
301: GVLLVGYGSG AYAPIRMKEK PFWIIKNSWG ENWGENGYYK ICRGRNICGV DSMVSTVASV HTTTQ
101: LTPSEFRNKV LGLRGVRLPL DANKAPILPT DNLPSDFDWR DHGAVTPVKN QGSCGSCWSF STTGALEGAH FLSTGELVSL SEQQLVDCDH ECDPEEPGSC
201: DSGCNGGLMN SAFEYILKSG GVMREEDYPY SGADSGTCKF DKTKIAASVA NFSVVSLDED QIAANLVKNG PLAVAINAAY MQTYIGGVSC PYVCSRRLNH
301: GVLLVGYGSG AYAPIRMKEK PFWIIKNSWG ENWGENGYYK ICRGRNICGV DSMVSTVASV HTTTQ
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.