Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 8
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17382 | Soybean | endoplasmic reticulum | 93.51 | 94.28 |
| KRH51767 | Soybean | endoplasmic reticulum | 79.46 | 80.33 |
| KRH61087 | Soybean | endoplasmic reticulum | 78.11 | 78.96 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 72.16 | 73.15 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 72.97 | 72.78 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 71.89 | 72.48 |
| KRH49717 | Soybean | endoplasmic reticulum | 34.32 | 72.16 |
| KRH24406 | Soybean | extracellular | 69.46 | 70.41 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 70.0 | 70.38 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 70.0 | 70.38 |
| KRH29385 | Soybean | extracellular | 68.92 | 70.25 |
| CDY34441 | Canola | endoplasmic reticulum | 69.73 | 70.11 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 69.19 | 69.57 |
| PGSC0003DMT400009507 | Potato | extracellular | 67.84 | 69.15 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 55.14 | 68.69 |
| Solyc04g080960.2.1 | Tomato | extracellular | 67.3 | 68.59 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 65.95 | 66.67 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 44.59 | 66.53 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 67.03 | 66.49 |
| EES05034 | Sorghum | endoplasmic reticulum | 66.49 | 66.31 |
| Zm00001d016446_P001 | Maize | extracellular | 65.95 | 65.77 |
| Os02t0469600-01 | Rice | extracellular | 66.22 | 65.68 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 65.95 | 65.59 |
| HORVU7Hr1G074340.1 | Barley | plastid | 42.7 | 65.29 |
| CDX90537 | Canola | endoplasmic reticulum | 64.05 | 64.75 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 58.92 | 64.5 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 63.78 | 64.48 |
| TraesCS2A01G273100.1 | Wheat | golgi | 65.95 | 64.38 |
| TraesCS5A01G326100.1 | Wheat | golgi | 65.41 | 64.19 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 65.41 | 64.19 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 65.14 | 63.93 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 65.14 | 63.93 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 63.51 | 63.86 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 44.32 | 62.6 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 61.89 | 62.4 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 54.32 | 53.17 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 48.65 | 51.43 |
| Os04t0311400-01 | Rice | nucleus | 51.89 | 50.0 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 51.08 | 49.74 |
| KRH12540 | Soybean | extracellular | 39.19 | 40.96 |
| KRH02604 | Soybean | vacuole | 37.84 | 39.66 |
| KRH13188 | Soybean | peroxisome | 9.46 | 39.33 |
| KRG98609 | Soybean | mitochondrion | 29.73 | 36.91 |
| KRH37496 | Soybean | vacuole | 38.11 | 34.73 |
| KRG99207 | Soybean | cytosol, nucleus, plastid | 24.05 | 33.33 |
| KRH68369 | Soybean | nucleus | 23.24 | 24.09 |
| KRG96636 | Soybean | nucleus | 22.7 | 23.6 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 5.95 | 22.92 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EntrezGene:547893 | EMBL:ACUP02010783 | MEROPS:C01.022 | EnsemblPlantsGene:GLYMA_17G254900 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | UniProt:K7MNZ5 | EnsemblPlants:KRH05898 | ProteinID:KRH05898 |
| ProteinID:KRH05898.1 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF365 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233E96D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:+:40877661..40880998
Molecular Weight (calculated)
40383.8 Da
IEP (calculated)
6.690
GRAVY (calculated)
-0.203
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MARHSLLLAL LLFAAVATAA MAVAASDADD ILIRQVVPDV GEAEEEDNLL NAEHHFASFK AKFAKTYATK EEHDHRFGVF KSNLRRARLH AKLDPSAVHG
101: VTKFSDLTPA EFRRQFLGLK PLRFPAHAQK APILPTKDLP KDFDWRDKGA VTNVKDQGAC GSCWSFSTTG ALEGAHYLAT GELVSLSEQQ LVDCDHVCDP
201: EEYGACDSGC NGGLMNNAFE YILQSGGVQK EKDYPYTGRD GTCKFDKTKV AATVSNYSVV SLDEEQIAAN LVKNGPLAVA INAVFMQTYV GGVSCPYICG
301: KHLDHGVLLV GYGEGAYAPI RFKNKPYWII KNSWGESWGE NGYYKICRGR NVCGVDSMVS TVAAIYPSSH
101: VTKFSDLTPA EFRRQFLGLK PLRFPAHAQK APILPTKDLP KDFDWRDKGA VTNVKDQGAC GSCWSFSTTG ALEGAHYLAT GELVSLSEQQ LVDCDHVCDP
201: EEYGACDSGC NGGLMNNAFE YILQSGGVQK EKDYPYTGRD GTCKFDKTKV AATVSNYSVV SLDEEQIAAN LVKNGPLAVA INAVFMQTYV GGVSCPYICG
301: KHLDHGVLLV GYGEGAYAPI RFKNKPYWII KNSWGESWGE NGYYKICRGR NVCGVDSMVS TVAAIYPSSH
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
Arabidopsis Description
RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.