Factsheet for Bra012733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90537	Canola	endoplasmic reticulum	98.1	98.63
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	81.25	81.25
AT4G16190.1	Thale cress	endoplasmic reticulum, extracellular	80.98	79.89
VIT_18s0001g13400.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	67.39	66.85
KRH61087	Soybean	endoplasmic reticulum	66.3	66.67
PGSC0003DMT400009507	Potato	extracellular	65.76	66.67
KRH51767	Soybean	endoplasmic reticulum	66.03	66.39
VIT_18s0001g13390.t01	Wine grape	endoplasmic reticulum	66.03	66.03
GSMUA_Achr3P17220_001	Banana	nucleus	53.26	65.99
Solyc04g080960.2.1	Tomato	extracellular	64.95	65.84
VIT_04s0023g02450.t01	Wine grape	vacuole	65.49	65.67
Bra011877.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	64.4	64.58
KRH17382	Soybean	endoplasmic reticulum	63.59	63.76
VIT_18s0001g13380.t01	Wine grape	extracellular	63.04	63.56
KRH05898	Soybean	endoplasmic reticulum, vacuole	63.86	63.51
Bra031189.1-P	Field mustard	nucleus	53.53	62.74
GSMUA_Achr6P27980_001	Banana	vacuole	63.04	62.37
Bra030299.1-P	Field mustard	endoplasmic reticulum	61.14	62.15
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	61.41	61.75
HORVU7Hr1G069280.1	Barley	nucleus	41.3	61.29
Os02t0469600-01	Rice	extracellular	60.87	60.05
EES05034	Sorghum	endoplasmic reticulum	60.05	59.57
Zm00001d016446_P001	Maize	extracellular	59.24	58.76
HORVU7Hr1G074340.1	Barley	plastid	38.59	58.68
TraesCS5A01G326100.1	Wheat	golgi	60.05	58.62
TraesCS5B01G326500.1	Wheat	extracellular	60.05	58.62
TraesCS5D01G332200.1	Wheat	extracellular	60.05	58.62
HORVU5Hr1G082810.1	Barley	vacuole	60.05	58.62
KXG26035	Sorghum	endoplasmic reticulum, golgi, vacuole	53.8	58.58
TraesCS2A01G273100.1	Wheat	golgi	60.05	58.31
TraesCS2D01G272400.1	Wheat	endoplasmic reticulum, golgi	57.07	57.22
HORVU4Hr1G082210.1	Barley	cytosol, mitochondrion, nucleus, plastid	40.49	56.87
Bra010706.1-P	Field mustard	vacuole	64.95	53.23
KRH49717	Soybean	endoplasmic reticulum	24.73	51.7
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.54	51.1
HORVU2Hr1G066680.1	Barley	endoplasmic reticulum	50.27	48.94
Os04t0311400-01	Rice	nucleus	47.83	45.83
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	35.33	36.21
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.24	35.1
Bra036565.1-P	Field mustard	extracellular	20.11	33.64
Bra030498.1-P	Field mustard	vacuole	20.65	21.29
Bra036321.1-P	Field mustard	vacuole	20.38	20.95
Bra006666.1-P	Field mustard	vacuole	22.55	18.53
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	16.85	18.02
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	8.15	13.04

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra012733	EnsemblPlants:Bra012733.1	EnsemblPlants:Bra012733.1-P	MEROPS:C01.A06
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4D8C3	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645
SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025408A8	:

Description

AT4G16190 (E=2e-177) | cysteine proteinase, putative

Coordinates

chrA03:+:22527488..22528856

Molecular Weight (calculated)

40954.7 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.312

Length

368 amino acids

Sequence
(BLAST)

001: MMMDLAVFSL LIASALFVTI SGVVDDGFGN PIKQVVREEN DEQLLNLDHQ FTQFKSKYEK TYKNQVEHDH RFRVFKANVR RARRHQQLDP SAVHGVTQFS
101: DVTPKEFSRK YLGLKRRFSL PNDTQKAAIL PTSELPTDFD WREKGAVTPV KNQGLCGSCW SFSATGALEG AHFLATKELV SLSEQQLIDC DHTCDPQEAN
201: SCDTGCRGGL MNNAFEYTLK TGGLMKEQDY PYTGRDRSVC KFNKTMIAAK VSNFSVVSAD EDQIAANLVQ NGPLAIAINA LWMQTYIAGV SCPYVCSKNQ
301: DHGVLLVGFG SAGYAPLRLE EKPYWIIKNS WGSMWGEKGY YKICRGTPNI CGVDTMVSTV AAVHTTPQ

Best Arabidopsis Sequence Match ( AT4G16190.1 )
(BLAST)

001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK

Arabidopsis Description

RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.