Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 79.59 | 73.3 |
| TraesCS2A01G273100.1 | Wheat | golgi | 79.59 | 70.98 |
| EES05034 | Sorghum | endoplasmic reticulum | 73.67 | 67.12 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 71.3 | 65.85 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 57.4 | 65.32 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 70.12 | 63.71 |
| KRH51767 | Soybean | endoplasmic reticulum | 65.98 | 60.93 |
| KRH61087 | Soybean | endoplasmic reticulum | 65.68 | 60.66 |
| KRH17382 | Soybean | endoplasmic reticulum | 64.79 | 59.67 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 64.5 | 58.92 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 63.61 | 58.58 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 65.09 | 58.2 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 63.31 | 57.68 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.13 | 57.07 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 62.13 | 57.07 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 62.13 | 57.07 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 62.72 | 56.84 |
| CDY34441 | Canola | endoplasmic reticulum | 61.83 | 56.79 |
| PGSC0003DMT400009507 | Potato | extracellular | 60.95 | 56.75 |
| Solyc04g080960.2.1 | Tomato | extracellular | 60.65 | 56.47 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 60.95 | 56.44 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 58.88 | 54.37 |
| CDX90537 | Canola | endoplasmic reticulum | 58.88 | 54.37 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 58.58 | 53.8 |
| Os04t0311400-01 | Rice | nucleus | 59.76 | 52.6 |
| EER97214 | Sorghum | endoplasmic reticulum, extracellular | 47.04 | 42.63 |
| KRH49717 | Soybean | endoplasmic reticulum | 18.34 | 35.23 |
| EER96801 | Sorghum | endoplasmic reticulum, vacuole | 29.88 | 27.82 |
| KXG36303 | Sorghum | vacuole | 18.64 | 17.75 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A1B6PK40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlants:KXG26035 |
| ProteinID:KXG26035 | ProteinID:KXG26035.1 | PFAM:PF00112 | PFAM:PF08246 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF380 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | EnsemblPlantsGene:SORBI_3006G043600 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | UniParc:UPI00081AC456 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:30284140..30288244
Molecular Weight (calculated)
37321.1 Da
IEP (calculated)
7.282
GRAVY (calculated)
-0.378
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRLLLLLL AFLFSTAALC SPDASAAEDP LIEQVVGDGA DDELELNAEA HFASFVRRFG KTYRDDEERA HRMSVFKANL LRSRRHQRLD PTAVHGVTKF
101: SDLTPAEFRR QFLGLRRSRS SGQDLLKGSG SAHEAPILPT DGLPTDFDWR EHGAVGPVKD QCDPSEPRSC DSGCNGGLMT TAFSYLQKVG GLEREEDYPY
201: NGRDSTCKFD KSKIVAQVNN FSVVSVNEDQ IAANLVKHGP LAIGINAVFM QTYIGGVSCP YICGRHLDHG VLLVGYGSAG YAPIRFKEKP YWIIKNSWGE
301: NWGENGYYKI CRGPHVQNKC GVDSMVSTVT AIHSSKKE
101: SDLTPAEFRR QFLGLRRSRS SGQDLLKGSG SAHEAPILPT DGLPTDFDWR EHGAVGPVKD QCDPSEPRSC DSGCNGGLMT TAFSYLQKVG GLEREEDYPY
201: NGRDSTCKFD KSKIVAQVNN FSVVSVNEDQ IAANLVKHGP LAIGINAVFM QTYIGGVSCP YICGRHLDHG VLLVGYGSAG YAPIRFKEKP YWIIKNSWGE
301: NWGENGYYKI CRGPHVQNKC GVDSMVSTVT AIHSSKKE
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.