Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 7
- plasma membrane 5
- golgi 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d016446_P001 | Maize | extracellular | 94.34 | 94.34 |
Os02t0469600-01 | Rice | extracellular | 87.6 | 87.13 |
HORVU5Hr1G082810.1 | Barley | vacuole | 81.4 | 80.11 |
TraesCS5D01G332200.1 | Wheat | extracellular | 81.13 | 79.84 |
TraesCS5A01G326100.1 | Wheat | golgi | 81.13 | 79.84 |
TraesCS5B01G326500.1 | Wheat | extracellular | 80.86 | 79.58 |
HORVU7Hr1G069280.1 | Barley | nucleus | 52.56 | 78.63 |
HORVU7Hr1G074340.1 | Barley | plastid | 50.4 | 77.27 |
GSMUA_Achr3P17220_001 | Banana | nucleus | 60.38 | 75.42 |
HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 52.56 | 74.43 |
KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 67.12 | 73.67 |
GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 70.08 | 71.04 |
GSMUA_Achr6P27980_001 | Banana | vacuole | 70.89 | 70.7 |
PGSC0003DMT400009507 | Potato | extracellular | 66.04 | 67.49 |
KRH51767 | Soybean | endoplasmic reticulum | 66.58 | 67.49 |
CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 66.31 | 66.85 |
Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 66.31 | 66.85 |
KRH17382 | Soybean | endoplasmic reticulum | 66.04 | 66.76 |
KRH61087 | Soybean | endoplasmic reticulum | 65.77 | 66.67 |
Solyc04g080960.2.1 | Tomato | extracellular | 65.23 | 66.67 |
CDY34441 | Canola | endoplasmic reticulum | 66.04 | 66.58 |
KRH05898 | Soybean | endoplasmic reticulum, vacuole | 66.31 | 66.49 |
VIT_04s0023g02450.t01 | Wine grape | vacuole | 64.69 | 65.4 |
VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 64.96 | 64.96 |
VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 63.88 | 64.4 |
VIT_18s0001g13380.t01 | Wine grape | extracellular | 63.07 | 64.11 |
AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 63.61 | 63.27 |
CDY09707 | Canola | endoplasmic reticulum, extracellular | 60.11 | 60.93 |
CDX90537 | Canola | endoplasmic reticulum | 59.84 | 60.66 |
Bra012733.1-P | Field mustard | endoplasmic reticulum | 59.57 | 60.05 |
EER97214 | Sorghum | endoplasmic reticulum, extracellular | 52.56 | 52.28 |
KRH49717 | Soybean | endoplasmic reticulum | 24.8 | 52.27 |
EER96801 | Sorghum | endoplasmic reticulum, vacuole | 34.77 | 35.54 |
KXG36303 | Sorghum | vacuole | 19.95 | 20.85 |
Protein Annotations
MapMan:19.4.1.1 | Gene3D:3.90.70.10 | EntrezGene:8084497 | UniProt:C5Y171 | EnsemblPlants:EES05034 | ProteinID:EES05034 |
ProteinID:EES05034.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | PFAM:PF00112 | PFAM:PF08246 |
PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF338 |
InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | EnsemblPlantsGene:SORBI_3004G142800 | SUPFAM:SSF54001 | unigene:Sbi.14211 |
SignalP:SignalP-noTM | UniParc:UPI0001A854F1 | RefSeq:XP_002452058.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:42416234..42419766
Molecular Weight (calculated)
40445.7 Da
IEP (calculated)
6.662
GRAVY (calculated)
-0.299
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHRVLLLLS LAAAVAVAAA VDTEDPLIRQ VVPGGDDNEL ELNAESHFLS FVQRFGKSYK DAEEHAYRLS IFKANLRRAR RHQLLDPSAE HGVTKFSDLT
101: PAEFRRTYLG LRKSRRALLR ELGKSANEAP VLPTDGLPDD FDWRDHGAVT PVKNQGSCGS CWSFSTSGAL EGAHYLATGK LEVLSEQQMV DCDHVCDTSE
201: PDSCDSGCNG GLMTNAFSYL QKAGGLESEK DYPYTGSDDK CKFDKSKIVA SVQNFSVVSV DEGQIAANLI KHGPLAIGIN AAYMQTYIGG VSCPYICGRT
301: LDHGVLLVGY GAAGFAPIRL KDKPYWIIKN SWGENWGENG YYKICRGSNV RNKCGVDSMV STVSAVRTSK E
101: PAEFRRTYLG LRKSRRALLR ELGKSANEAP VLPTDGLPDD FDWRDHGAVT PVKNQGSCGS CWSFSTSGAL EGAHYLATGK LEVLSEQQMV DCDHVCDTSE
201: PDSCDSGCNG GLMTNAFSYL QKAGGLESEK DYPYTGSDDK CKFDKSKIVA SVQNFSVVSV DEGQIAANLI KHGPLAIGIN AAYMQTYIGG VSCPYICGRT
301: LDHGVLLVGY GAAGFAPIRL KDKPYWIIKN SWGENWGENG YYKICRGSNV RNKCGVDSMV STVSAVRTSK E
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.