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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016446_P001 Maize extracellular 94.34 94.34
Os02t0469600-01 Rice extracellular 87.6 87.13
HORVU5Hr1G082810.1 Barley vacuole 81.4 80.11
TraesCS5D01G332200.1 Wheat extracellular 81.13 79.84
TraesCS5A01G326100.1 Wheat golgi 81.13 79.84
TraesCS5B01G326500.1 Wheat extracellular 80.86 79.58
HORVU7Hr1G069280.1 Barley nucleus 52.56 78.63
HORVU7Hr1G074340.1 Barley plastid 50.4 77.27
GSMUA_Achr3P17220_001 Banana nucleus 60.38 75.42
HORVU4Hr1G082210.1 Barley cytosol, mitochondrion, nucleus, plastid 52.56 74.43
KXG26035 Sorghum endoplasmic reticulum, golgi, vacuole 67.12 73.67
GSMUA_Achr6P21090_001 Banana endoplasmic reticulum 70.08 71.04
GSMUA_Achr6P27980_001 Banana vacuole 70.89 70.7
PGSC0003DMT400009507 Potato extracellular 66.04 67.49
KRH51767 Soybean endoplasmic reticulum 66.58 67.49
CDY32227 Canola endoplasmic reticulum, extracellular, vacuole 66.31 66.85
Bra033545.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 66.31 66.85
KRH17382 Soybean endoplasmic reticulum 66.04 66.76
KRH61087 Soybean endoplasmic reticulum 65.77 66.67
Solyc04g080960.2.1 Tomato extracellular 65.23 66.67
CDY34441 Canola endoplasmic reticulum 66.04 66.58
KRH05898 Soybean endoplasmic reticulum, vacuole 66.31 66.49
VIT_04s0023g02450.t01 Wine grape vacuole 64.69 65.4
VIT_18s0001g13400.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 64.96 64.96
VIT_18s0001g13390.t01 Wine grape endoplasmic reticulum 63.88 64.4
VIT_18s0001g13380.t01 Wine grape extracellular 63.07 64.11
AT4G16190.1 Thale cress endoplasmic reticulum, extracellular 63.61 63.27
CDY09707 Canola endoplasmic reticulum, extracellular 60.11 60.93
CDX90537 Canola endoplasmic reticulum 59.84 60.66
Bra012733.1-P Field mustard endoplasmic reticulum 59.57 60.05
EER97214 Sorghum endoplasmic reticulum, extracellular 52.56 52.28
KRH49717 Soybean endoplasmic reticulum 24.8 52.27
EER96801 Sorghum endoplasmic reticulum, vacuole 34.77 35.54
KXG36303 Sorghum vacuole 19.95 20.85
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10EntrezGene:8084497UniProt:C5Y171EnsemblPlants:EES05034ProteinID:EES05034
ProteinID:EES05034.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF338
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3004G142800SUPFAM:SSF54001unigene:Sbi.14211
SignalP:SignalP-noTMUniParc:UPI0001A854F1RefSeq:XP_002452058.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:42416234..42419766
Molecular Weight (calculated)
40445.7 Da
IEP (calculated)
6.662
GRAVY (calculated)
-0.299
Length
371 amino acids
Sequence
(BLAST)
001: MAHRVLLLLS LAAAVAVAAA VDTEDPLIRQ VVPGGDDNEL ELNAESHFLS FVQRFGKSYK DAEEHAYRLS IFKANLRRAR RHQLLDPSAE HGVTKFSDLT
101: PAEFRRTYLG LRKSRRALLR ELGKSANEAP VLPTDGLPDD FDWRDHGAVT PVKNQGSCGS CWSFSTSGAL EGAHYLATGK LEVLSEQQMV DCDHVCDTSE
201: PDSCDSGCNG GLMTNAFSYL QKAGGLESEK DYPYTGSDDK CKFDKSKIVA SVQNFSVVSV DEGQIAANLI KHGPLAIGIN AAYMQTYIGG VSCPYICGRT
301: LDHGVLLVGY GAAGFAPIRL KDKPYWIIKN SWGENWGENG YYKICRGSNV RNKCGVDSMV STVSAVRTSK E
Best Arabidopsis Sequence Match ( AT4G39090.1 )
(BLAST)
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.