Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 79.45 | 78.17 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 77.26 | 76.63 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 76.99 | 76.57 |
| KRH61087 | Soybean | endoplasmic reticulum | 74.25 | 74.04 |
| KRH51767 | Soybean | endoplasmic reticulum | 73.42 | 73.22 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 73.15 | 72.16 |
| KRH17382 | Soybean | endoplasmic reticulum | 71.78 | 71.39 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 73.7 | 71.35 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 57.53 | 70.71 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 69.32 | 69.13 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 69.04 | 68.48 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.04 | 68.48 |
| CDY34441 | Canola | endoplasmic reticulum | 69.04 | 68.48 |
| Solyc04g080960.2.1 | Tomato | extracellular | 67.67 | 68.04 |
| PGSC0003DMT400009507 | Potato | extracellular | 66.58 | 66.94 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 67.67 | 66.4 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 67.4 | 65.95 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 43.56 | 64.11 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 64.11 | 63.93 |
| CDX90537 | Canola | endoplasmic reticulum | 63.56 | 63.39 |
| EES05034 | Sorghum | endoplasmic reticulum | 64.11 | 63.07 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 63.56 | 63.04 |
| Os02t0469600-01 | Rice | extracellular | 64.11 | 62.73 |
| Zm00001d016446_P001 | Maize | extracellular | 63.56 | 62.53 |
| TraesCS2A01G273100.1 | Wheat | golgi | 64.93 | 62.53 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 64.11 | 62.07 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 61.92 | 61.58 |
| HORVU7Hr1G074340.1 | Barley | plastid | 40.55 | 61.16 |
| TraesCS5A01G326100.1 | Wheat | golgi | 63.01 | 61.01 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 63.01 | 61.01 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 63.01 | 61.01 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 56.44 | 60.95 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 43.01 | 59.92 |
| KRH49717 | Soybean | endoplasmic reticulum | 26.58 | 55.11 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 54.25 | 52.38 |
| VIT_13s0019g05120.t01 | Wine grape | extracellular, golgi, vacuole | 51.78 | 50.4 |
| Os04t0311400-01 | Rice | nucleus | 50.96 | 48.44 |
| VIT_08s0007g05150.t01 | Wine grape | cytosol | 9.04 | 41.25 |
| VIT_11s0016g01070.t01 | Wine grape | extracellular | 36.99 | 37.29 |
| VIT_16s0098g00930.t01 | Wine grape | cytosol | 8.77 | 37.21 |
| VIT_05s0049g01580.t01 | Wine grape | cytosol, mitochondrion, nucleus | 8.77 | 37.21 |
| VIT_15s0024g01100.t01 | Wine grape | endoplasmic reticulum | 12.88 | 23.98 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 22.47 | 20.92 |
Protein Annotations
| EntrezGene:100245344 | wikigene:100245344 | MapMan:19.4.1.1 | Gene3D:3.90.70.10 | MEROPS:C01.022 | ProteinID:CBI19783 |
| ProteinID:CBI19783.3 | UniProt:E0CPG7 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 |
| EntrezGene:LOC100245344 | wikigene:LOC100245344 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF365 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001BE1C03 | ArrayExpress:VIT_18s0001g13380 |
| EnsemblPlantsGene:VIT_18s0001g13380 | EnsemblPlants:VIT_18s0001g13380.t01 | RefSeq:XP_002280808 | RefSeq:XP_002280808.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr18:+:11409762..11411534
Molecular Weight (calculated)
40123.3 Da
IEP (calculated)
5.754
GRAVY (calculated)
-0.143
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCLLRSVLL LFVPFLLFFG AMSDVSSNEL DDLLIRQVVS NSDDLLSAEH HFAAFKARFR KTYATAEEHD YRFSIFKANL RRAKRNQLLD PSAVHGVTRF
101: SDLTPAEFRQ NYLGLKPLRF PIDTQQAPIL PTNDLPTDFD WRDHGAVTAV KDQGECGSCW SFSTTGALEG AHFLATGNLV SLSEQQLVDC DHECDPEEYG
201: ACDRGCNGGL MNTAFEYILK AGGVVRGEDY PYTGTDGHCK FDKTKIAASV SNFSTVSIDE DQIAANLVKN GPLAVGINAI FMQSYAGGVS CPFICSTSLN
301: HGVLLVGYGS AGYSPIRFKE KPYWLLKNSW GQNWGEHGYY KICRGHNICG VDSMVSTVAA IQSAT
101: SDLTPAEFRQ NYLGLKPLRF PIDTQQAPIL PTNDLPTDFD WRDHGAVTAV KDQGECGSCW SFSTTGALEG AHFLATGNLV SLSEQQLVDC DHECDPEEYG
201: ACDRGCNGGL MNTAFEYILK AGGVVRGEDY PYTGTDGHCK FDKTKIAASV SNFSTVSIDE DQIAANLVKN GPLAVGINAI FMQSYAGGVS CPFICSTSLN
301: HGVLLVGYGS AGYSPIRFKE KPYWLLKNSW GQNWGEHGYY KICRGHNICG VDSMVSTVAA IQSAT
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.