Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17382 | Soybean | endoplasmic reticulum | 78.41 | 37.6 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 72.16 | 34.32 |
| KRH51767 | Soybean | endoplasmic reticulum | 57.39 | 27.6 |
| PGSC0003DMT400009507 | Potato | extracellular | 56.82 | 27.55 |
| KRH61087 | Soybean | endoplasmic reticulum | 56.82 | 27.32 |
| Solyc04g080960.2.1 | Tomato | extracellular | 56.25 | 27.27 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 55.11 | 26.58 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 54.55 | 26.16 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 53.41 | 25.68 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 53.41 | 25.54 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 53.41 | 25.54 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 53.41 | 25.34 |
| CDY34441 | Canola | endoplasmic reticulum | 52.84 | 25.27 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 53.41 | 25.27 |
| KRH29385 | Soybean | extracellular | 51.7 | 25.07 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 52.27 | 25.0 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 53.41 | 24.87 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 51.7 | 24.86 |
| CDX90537 | Canola | endoplasmic reticulum | 51.7 | 24.86 |
| EES05034 | Sorghum | endoplasmic reticulum | 52.27 | 24.8 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 51.7 | 24.73 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 52.27 | 24.66 |
| KRH24406 | Soybean | extracellular | 51.14 | 24.66 |
| TraesCS2A01G273100.1 | Wheat | golgi | 52.84 | 24.54 |
| Zm00001d016446_P001 | Maize | extracellular | 51.14 | 24.26 |
| Os02t0469600-01 | Rice | extracellular | 50.57 | 23.86 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 48.86 | 22.81 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 48.86 | 22.81 |
| TraesCS5A01G326100.1 | Wheat | golgi | 48.86 | 22.81 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 48.3 | 22.55 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 46.59 | 22.34 |
| KRG91982 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.32 | 22.29 |
| KRH34798 | Soybean | endoplasmic reticulum, golgi | 44.89 | 20.79 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 35.23 | 18.34 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 30.68 | 18.18 |
| KRH02604 | Soybean | vacuole | 34.66 | 17.28 |
| KRH12540 | Soybean | extracellular | 34.09 | 16.95 |
| KRG98609 | Soybean | mitochondrion | 28.41 | 16.78 |
| KRH37496 | Soybean | vacuole | 34.66 | 15.02 |
| KRG99207 | Soybean | cytosol, nucleus, plastid | 22.73 | 14.98 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 21.02 | 14.12 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 19.32 | 13.71 |
| Os04t0311400-01 | Rice | nucleus | 29.55 | 13.54 |
| HORVU7Hr1G074340.1 | Barley | plastid | 18.18 | 13.22 |
| KRH13188 | Soybean | peroxisome | 6.25 | 12.36 |
| KRG96636 | Soybean | nucleus | 17.61 | 8.71 |
| KRH68369 | Soybean | nucleus | 17.61 | 8.68 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 2.27 | 4.17 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | UniProt:A0A0R0JBA3 | EMBL:ACUP02004605 | EnsemblPlantsGene:GLYMA_07G174700 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlants:KRH49717 | ProteinID:KRH49717 | ProteinID:KRH49717.1 | PFAM:PF00112 | PFAM:PF08246 |
| ScanProsite:PS00139 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF365 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0006ED5870 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:31508174..31509913
Molecular Weight (calculated)
19668.3 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.232
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYSFLLAL LLLLFAVVTS TTDDILIRQV VPDAVSEATE KEDEDHLLNE EHHFTSFKAK FGKKYVTKEE HNRRFGVFKS NLHRARLHAK LDPSVVHNIT
101: KLSDLTSTEF HKGAITNVKD QGACGLCWSF STTRSLEGAH YLATGELGSL SEQQLVDCDH VVSCLGTGCR HGLWPN
101: KLSDLTSTEF HKGAITNVKD QGACGLCWSF STTRSLEGAH YLATGELGSL SEQQLVDCDH VVSCLGTGCR HGLWPN
001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
Arabidopsis Description
RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.