Factsheet for Solyc04g080960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plastid: 26371478
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009507	Potato	extracellular	95.87	95.87
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	71.9	70.92
CDY32227	Canola	endoplasmic reticulum, extracellular, vacuole	71.9	70.92
CDY34441	Canola	endoplasmic reticulum	71.9	70.92
KRH51767	Soybean	endoplasmic reticulum	71.35	70.77
KRH61087	Soybean	endoplasmic reticulum	70.52	69.95
GSMUA_Achr3P17220_001	Banana	nucleus	56.47	69.02
VIT_18s0001g13400.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	69.97	68.46
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	69.42	68.29
KRH17382	Soybean	endoplasmic reticulum	68.59	67.85
VIT_18s0001g13380.t01	Wine grape	extracellular	68.04	67.67
VIT_04s0023g02450.t01	Wine grape	vacuole	68.04	67.3
KRH05898	Soybean	endoplasmic reticulum, vacuole	68.59	67.3
AT4G16190.1	Thale cress	endoplasmic reticulum, extracellular	69.15	67.29
CDY09707	Canola	endoplasmic reticulum, extracellular	66.94	66.39
VIT_18s0001g13390.t01	Wine grape	endoplasmic reticulum	67.22	66.3
CDX90537	Canola	endoplasmic reticulum	66.12	65.57
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	65.84	65.3
Zm00001d016446_P001	Maize	extracellular	66.67	65.23
EES05034	Sorghum	endoplasmic reticulum	66.67	65.23
GSMUA_Achr6P27980_001	Banana	vacuole	66.67	65.05
Bra012733.1-P	Field mustard	endoplasmic reticulum	65.84	64.95
Os02t0469600-01	Rice	extracellular	66.67	64.88
HORVU7Hr1G069280.1	Barley	nucleus	43.8	64.11
TraesCS2A01G273100.1	Wheat	golgi	66.39	63.59
TraesCS2D01G272400.1	Wheat	endoplasmic reticulum, golgi	63.64	62.94
HORVU7Hr1G074340.1	Barley	plastid	41.87	62.81
TraesCS5D01G332200.1	Wheat	extracellular	65.01	62.6
TraesCS5B01G326500.1	Wheat	extracellular	65.01	62.6
TraesCS5A01G326100.1	Wheat	golgi	65.01	62.6
HORVU5Hr1G082810.1	Barley	vacuole	64.74	62.33
HORVU4Hr1G082210.1	Barley	cytosol, mitochondrion, nucleus, plastid	44.08	61.07
KXG26035	Sorghum	endoplasmic reticulum, golgi, vacuole	56.47	60.65
KRH49717	Soybean	endoplasmic reticulum	27.27	56.25
HORVU2Hr1G066680.1	Barley	endoplasmic reticulum	55.92	53.7
Solyc11g008260.1.1	Tomato	extracellular	55.37	52.07
Os04t0311400-01	Rice	nucleus	52.07	49.22
Solyc07g041900.2.1	Tomato	extracellular	36.09	36.8
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	25.9	36.15
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	21.76	22.32
Solyc02g069100.2.1	Tomato	plastid	20.94	21.47
Solyc02g069090.2.1	Tomato	extracellular	20.39	21.02

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	MEROPS:C01.022	GO:GO:0000323	GO:GO:0003674	GO:GO:0003824
GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0051603	UniProt:K4BVH5	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF338	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g080960.2	EnsemblPlants:Solyc04g080960.2.1	UniParc:UPI0002765C8E	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:65016636..65019061

Molecular Weight (calculated)

40230.6 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.337

Length

363 amino acids

Sequence
(BLAST)

001: MDRLFLLSFL AFALFSSAIA FSDDDPLIRQ VVSGNDDNHM LNAEHHFSLF KAKFGKIYAS QEEHDHRLKV FKANLHRAKR HQLLDPSAEH GITQFSDLTP
101: SEFRRTYLGL NKPRPNLNAE KAPILPTKDL PSDFDWREKG AVTDVKNQGS CGSCWSFSTT GAVEGAHFLA TGELVSLSEQ QLVDCDHECD PVEKNDCDAG
201: CNGGLMTTAF EYTLKAGGLQ LEKDYPYTGR NGKCHFDKSR IAASVSNFSV VGLDEDQIAA NLLKHGPLAV GINAAWMQTY VRGVSCPLIC FKRQDHGVLL
301: VGYGSEGFAP IRLKNKPYWI IKNSWGKTWG EHGYYKICRG HNICGVDAMV STVTATHTTN PNL

Best Arabidopsis Sequence Match ( AT4G16190.1 )
(BLAST)

001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK

Arabidopsis Description

RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.