Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G074340.1 | Barley | plastid | 86.26 | 93.39 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 79.77 | 84.27 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 85.5 | 59.42 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 83.59 | 58.09 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 83.59 | 58.09 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 65.65 | 57.91 |
| TraesCS5A01G326100.1 | Wheat | golgi | 83.21 | 57.82 |
| Os02t0469600-01 | Rice | extracellular | 78.24 | 54.96 |
| Zm00001d016446_P001 | Maize | extracellular | 76.34 | 53.91 |
| EES05034 | Sorghum | endoplasmic reticulum | 74.43 | 52.56 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 67.18 | 47.31 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 66.03 | 47.27 |
| KRH61087 | Soybean | endoplasmic reticulum | 64.5 | 46.17 |
| KRH51767 | Soybean | endoplasmic reticulum | 64.12 | 45.9 |
| PGSC0003DMT400009507 | Potato | extracellular | 62.6 | 45.18 |
| KRH17382 | Soybean | endoplasmic reticulum | 62.6 | 44.69 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 62.6 | 44.32 |
| Solyc04g080960.2.1 | Tomato | extracellular | 61.07 | 44.08 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 61.07 | 43.6 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 61.07 | 43.48 |
| CDY34441 | Canola | endoplasmic reticulum | 61.07 | 43.48 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.07 | 43.48 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 59.92 | 43.01 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 60.31 | 42.93 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 60.69 | 42.63 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 60.31 | 42.59 |
| CDX90537 | Canola | endoplasmic reticulum | 56.87 | 40.71 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 56.87 | 40.49 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 56.49 | 40.44 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 56.11 | 38.89 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 50.38 | 33.17 |
| HORVU5Hr1G061770.1 | Barley | extracellular, golgi, vacuole | 30.92 | 22.38 |
| KRH49717 | Soybean | endoplasmic reticulum | 14.12 | 21.02 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 25.57 | 18.93 |
| HORVU4Hr1G010360.3 | Barley | vacuole | 22.9 | 14.93 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 25.19 | 12.6 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A287PVE9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:HORVU4Hr1G082210 |
| EnsemblPlants:HORVU4Hr1G082210.1 | PFAM:PF00112 | PRINTS:PR00705 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF380 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| SMART:SM00645 | SUPFAM:SSF54001 | UniParc:UPI000B47900C | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:621720054..621722578
Molecular Weight (calculated)
28498.4 Da
IEP (calculated)
7.600
GRAVY (calculated)
-0.434
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: RRMRKAYRDS LNLLEANIQH TNTLPTAFPR TSTGGTTAPS APSRTRFPPG SCWSFSASRA LEGANYLASC KMEVLSEQQL VDCDHECDPS EPDSCDAGCN
101: GGLMASAFSY LLKSGGLERE KDYPYTGKDG TCKFDKSKID ASVQNYSVVA VDEEQIAANL VKYGPLAIGI NAAYMQTYIG GVSCPYICGR HLDHGVLLVG
201: YGASGFAPSR FKEKPYWIVK NSWGENWGDQ GYYKICRGSN VRNKCGVDSM VSTVSATHSS KE
101: GGLMASAFSY LLKSGGLERE KDYPYTGKDG TCKFDKSKID ASVQNYSVVA VDEEQIAANL VKYGPLAIGI NAAYMQTYIG GVSCPYICGR HLDHGVLLVG
201: YGASGFAPSR FKEKPYWIVK NSWGENWGDQ GYYKICRGSN VRNKCGVDSM VSTVSATHSS KE
001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH
Arabidopsis Description
RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.