Factsheet for Bra033545.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32227	Canola	endoplasmic reticulum, extracellular, vacuole	100.0	100.0
AT4G16190.1	Thale cress	endoplasmic reticulum, extracellular	86.41	85.25
Bra012733.1-P	Field mustard	endoplasmic reticulum	81.25	81.25
KRH61087	Soybean	endoplasmic reticulum	73.91	74.32
KRH51767	Soybean	endoplasmic reticulum	73.1	73.5
PGSC0003DMT400009507	Potato	extracellular	72.01	73.0
Solyc04g080960.2.1	Tomato	extracellular	70.92	71.9
VIT_04s0023g02450.t01	Wine grape	vacuole	70.65	70.84
KRH05898	Soybean	endoplasmic reticulum, vacuole	70.38	70.0
VIT_18s0001g13400.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	70.11	69.54
KRH17382	Soybean	endoplasmic reticulum	69.29	69.48
GSMUA_Achr3P17220_001	Banana	nucleus	55.98	69.36
VIT_18s0001g13380.t01	Wine grape	extracellular	68.48	69.04
Bra011877.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	68.75	68.94
VIT_18s0001g13390.t01	Wine grape	endoplasmic reticulum	68.48	68.48
Bra031189.1-P	Field mustard	nucleus	57.88	67.83
Bra030299.1-P	Field mustard	endoplasmic reticulum	66.3	67.4
EES05034	Sorghum	endoplasmic reticulum	66.85	66.31
GSMUA_Achr6P27980_001	Banana	vacuole	66.85	66.13
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	65.76	66.12
Zm00001d016446_P001	Maize	extracellular	66.58	66.04
Os02t0469600-01	Rice	extracellular	66.3	65.42
HORVU7Hr1G069280.1	Barley	nucleus	44.02	65.32
HORVU7Hr1G074340.1	Barley	plastid	41.85	63.64
HORVU5Hr1G082810.1	Barley	vacuole	63.86	62.33
TraesCS2A01G273100.1	Wheat	golgi	64.13	62.27
KXG26035	Sorghum	endoplasmic reticulum, golgi, vacuole	57.07	62.13
TraesCS2D01G272400.1	Wheat	endoplasmic reticulum, golgi	61.41	61.58
TraesCS5D01G332200.1	Wheat	extracellular	63.04	61.54
TraesCS5B01G326500.1	Wheat	extracellular	63.04	61.54
TraesCS5A01G326100.1	Wheat	golgi	63.04	61.54
HORVU4Hr1G082210.1	Barley	cytosol, mitochondrion, nucleus, plastid	43.48	61.07
Bra010706.1-P	Field mustard	vacuole	68.48	56.12
KRH49717	Soybean	endoplasmic reticulum	25.54	53.41
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.17	52.75
HORVU2Hr1G066680.1	Barley	endoplasmic reticulum	54.08	52.65
Os04t0311400-01	Rice	nucleus	50.82	48.7
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	36.14	37.05
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	35.33	36.21
Bra036565.1-P	Field mustard	extracellular	20.92	35.0
Bra030498.1-P	Field mustard	vacuole	22.01	22.69
Bra036321.1-P	Field mustard	vacuole	21.2	21.79
Bra006666.1-P	Field mustard	vacuole	23.1	18.97
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	16.85	18.02
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	8.97	14.35

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra033545	EnsemblPlants:Bra033545.1	EnsemblPlants:Bra033545.1-P	MEROPS:C01.A06
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4EXK8	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645
SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025448AD	SEG:seg

Description

AT4G16190 (E=7e-176) | cysteine proteinase, putative

Coordinates

chrA01:-:11229806..11231746

Molecular Weight (calculated)

40794.3 Da

IEP (calculated)

6.865

GRAVY (calculated)

-0.324

Length

368 amino acids

Sequence
(BLAST)

001: MNRVIFFLLV AAGLLVAITG EVVEDSFDNP IIRQVVPEEN DEQLLNAEHH FSLFKSKYQK TYATQAEHDH RFRVFKANLR RARRHQLLDP SAVHGVTQFS
101: DLTPKEFRRK YLGLKRKLRL PNDAQKAPIL PTSDLPTDFD WRDKGAVTPV KNQGSCGSCW SFSATGALEG AHFLATKELV SLSEQQLVDC DHECDPEEAN
201: SCDSGCGGGL MNNAFEYTLK AGGLMKESDY PYTGHDNSGC KFDKSMIAAR VSNFSVVSAD EDQIAANLVH HGPLAIAINA MWMQTYIGGV SCPYICSKSQ
301: DHGVLLVGFG SSGYAPIRLK EKPYWIIKNS WGSTWGEDGY YKICRGRHNI CGMDTMVSTV AAVHTSTQ

Best Arabidopsis Sequence Match ( AT4G16190.1 )
(BLAST)

001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK

Arabidopsis Description

RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.