Factsheet for Bra011877.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41960	Canola	endoplasmic reticulum, extracellular, vacuole	98.91	98.91
AT4G39090.1	Thale cress	endoplasmic reticulum, golgi, vacuole	92.1	91.85
Bra030299.1-P	Field mustard	endoplasmic reticulum	79.84	80.94
Bra031189.1-P	Field mustard	nucleus	66.76	78.03
Bra010706.1-P	Field mustard	vacuole	91.83	75.06
KRH29385	Soybean	extracellular	74.11	74.93
VIT_03s0038g00280.t01	Wine grape	endoplasmic reticulum	76.57	74.54
KRH24406	Soybean	extracellular	73.84	74.25
PGSC0003DMT400079506	Potato	endoplasmic reticulum, extracellular, vacuole	73.3	73.1
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	72.48	72.09
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	68.94	68.75
Bra012733.1-P	Field mustard	endoplasmic reticulum	64.58	64.4
CDY42605	Canola	plastid	32.43	56.13
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.41	50.82
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	37.33	38.16
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.24	37.05
Bra036565.1-P	Field mustard	extracellular	20.98	35.0
Bra030498.1-P	Field mustard	vacuole	21.53	22.13
Bra036321.1-P	Field mustard	vacuole	20.71	21.23
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	19.35	20.64
Bra006666.1-P	Field mustard	vacuole	23.71	19.42
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	7.63	12.17

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra011877	EnsemblPlants:Bra011877.1	EnsemblPlants:Bra011877.1-P	MEROPS:C01.022
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4D5X0	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF519
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI0002545E7F
SEG:seg	:	:	:	:	:

Description

AT4G39090 (E=2e-187) RD19, RD19A | RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase

Coordinates

chrA01:-:120449..121770

Molecular Weight (calculated)

40029.3 Da

IEP (calculated)

6.769

GRAVY (calculated)

-0.259

Length

367 amino acids

Sequence
(BLAST)

001: MDLLKLSFSL LLLSFLLVSV SSSSDGDDAV IRQVVDGAAE PNVLTSEDHF SLFKRKFGKV YASGEEHDYR FSVFKANLRR ARRHQKMDPS ARHGVTQFSD
101: LTRSEFREKH LGVKGGFKLP KDANKAPILP TENLPEDFDW RDHGAVTPVK NQGSCGSCWS FSATGALEGA NFLATGKLVS LSEQQLVDCD HECDPEEAGS
201: CDSGCNGGLM NSAFEYTLKT GGLMREEDYP YTGKDGPVCK LDKSKIVASV SNFSVISIDE EQIAANLVKN GPLAVAINAA YMQTYIGGVS CPYICTRRLN
301: HGVLLVGYGS AGYAPARFKE RPYWIIKNSW GETWGENGFY KICKGRNICG VDSLVSTVTA AVSTTAH

Best Arabidopsis Sequence Match ( AT4G39090.1 )
(BLAST)

001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH

Arabidopsis Description

RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.