Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38163 | Canola | golgi, vacuole | 59.13 | 85.0 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 30.0 | 39.43 |
| Bra030498.1-P | Field mustard | vacuole | 52.61 | 33.89 |
| Os05t0310500-02 | Rice | extracellular | 25.22 | 30.05 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 46.09 | 29.28 |
| Bra036321.1-P | Field mustard | vacuole | 43.04 | 27.65 |
| AT1G02300.1 | Thale cress | extracellular | 44.35 | 26.91 |
| Solyc02g069090.2.1 | Tomato | extracellular | 36.96 | 24.15 |
| TraesCS4B01G062400.1 | Wheat | extracellular | 35.65 | 23.3 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 36.09 | 23.12 |
| KXG36303 | Sorghum | vacuole | 35.22 | 22.82 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 34.78 | 22.6 |
| TraesCS4A01G252900.1 | Wheat | extracellular | 34.35 | 22.51 |
| TraesCS4D01G061400.1 | Wheat | extracellular | 33.04 | 22.16 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 35.22 | 22.07 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 33.91 | 22.03 |
| TraesCS4B01G062500.1 | Wheat | extracellular | 32.61 | 21.87 |
| TraesCS4A01G252800.1 | Wheat | unclear | 32.61 | 21.8 |
| Solyc02g069100.2.1 | Tomato | plastid | 33.04 | 21.47 |
| TraesCS4A01G252700.1 | Wheat | extracellular | 32.17 | 21.45 |
| TraesCS4B01G062600.1 | Wheat | vacuole | 33.04 | 21.11 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 35.22 | 20.66 |
| HORVU4Hr1G010360.3 | Barley | vacuole | 33.04 | 18.91 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 33.48 | 14.69 |
| PGSC0003DMT400026850 | Potato | extracellular | 14.78 | 13.77 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 5.65 | 13.54 |
| Zm00001d022297_P001 | Maize | cytosol, extracellular, nucleus | 3.04 | 9.59 |
| Bra033545.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 14.35 | 8.97 |
| Bra007118.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 13.91 | 8.79 |
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 13.04 | 8.15 |
| Bra030299.1-P | Field mustard | endoplasmic reticulum | 12.61 | 8.01 |
| Bra031189.1-P | Field mustard | nucleus | 10.87 | 7.96 |
| Bra011877.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 12.17 | 7.63 |
| Bra010706.1-P | Field mustard | vacuole | 14.35 | 7.35 |
| Bra020255.1-P | Field mustard | endoplasmic reticulum, vacuole | 10.0 | 6.41 |
| Bra002485.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 10.0 | 6.41 |
| Bra006663.1-P | Field mustard | extracellular, plasma membrane, vacuole | 7.83 | 5.23 |
| Bra036565.1-P | Field mustard | extracellular | 4.35 | 4.55 |
| Bra006666.1-P | Field mustard | vacuole | 6.52 | 3.35 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:35.1 | EnsemblPlantsGene:Bra039903 | EnsemblPlants:Bra039903.1 | EnsemblPlants:Bra039903.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004197 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 | UniProt:M4FFM9 | PFAM:PF08127 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C1A | InterPro:Propeptide_C1A | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI0002541191 | SEG:seg | : | : | : | : |
Description
AT1G02305 (E=7e-039) | cathepsin B-like cysteine protease, putative
Coordinates
chrA07:+:1750913..1753394
Molecular Weight (calculated)
25975.2 Da
IEP (calculated)
6.916
GRAVY (calculated)
-0.216
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHHHRIRV YLASAILLLA VINTNEIVKE VNENPNAGWT AAFNDRFANS TVAEFKRLLG VKPTPKNEFL GVPVVSHDIS LKLPKEFDAR TAWSQCSSIG
101: RILGFGLRFT VWEMIGWSPE CARYPADRDG ATVPEEIGSF AIANLEEEEE KEKKLQVSLR VSGDYGGEAW RRGRAWEIVT CFVMTFGSTY RACVLRYMGQ
201: PEECGIKTKE FAYEKMEAVM SKTMKTIQVL
101: RILGFGLRFT VWEMIGWSPE CARYPADRDG ATVPEEIGSF AIANLEEEEE KEKKLQVSLR VSGDYGGEAW RRGRAWEIVT CFVMTFGSTY RACVLRYMGQ
201: PEECGIKTKE FAYEKMEAVM SKTMKTIQVL
001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
Arabidopsis Description
CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.