Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G252900.1 | Wheat | extracellular | 95.74 | 96.01 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 94.32 | 93.79 |
| TraesCS4B01G062500.1 | Wheat | extracellular | 81.25 | 83.38 |
| TraesCS4B01G062600.1 | Wheat | vacuole | 78.41 | 76.67 |
| KXG36303 | Sorghum | vacuole | 75.57 | 74.93 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 51.14 | 72.58 |
| Zm00001d021615_P002 | Maize | extracellular, plasma membrane, vacuole | 70.45 | 67.57 |
| KRG96636 | Soybean | nucleus | 66.76 | 66.01 |
| KRH68369 | Soybean | nucleus | 65.91 | 64.99 |
| Bra030498.1-P | Field mustard | vacuole | 65.06 | 64.15 |
| PGSC0003DMT400026850 | Potato | extracellular | 44.89 | 63.97 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 64.77 | 62.98 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 64.49 | 62.36 |
| Bra036321.1-P | Field mustard | vacuole | 63.35 | 62.29 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 63.35 | 62.12 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 59.94 | 61.88 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 64.49 | 61.85 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 63.07 | 61.84 |
| CDY07129 | Canola | extracellular | 62.78 | 61.73 |
| CDY58223 | Canola | vacuole | 62.78 | 61.73 |
| Solyc02g069090.2.1 | Tomato | extracellular | 61.08 | 61.08 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 59.09 | 58.76 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 28.41 | 57.14 |
| Solyc02g069100.2.1 | Tomato | plastid | 57.39 | 57.06 |
| AT1G02300.1 | Thale cress | extracellular | 60.8 | 56.46 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 62.78 | 56.38 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 14.49 | 53.12 |
| Os05t0310500-02 | Rice | extracellular | 23.3 | 42.49 |
| CDY38163 | Canola | golgi, vacuole | 19.03 | 41.88 |
| Bra039903.1-P | Field mustard | extracellular, golgi, vacuole | 23.3 | 35.65 |
| TraesCS5B01G208100.1 | Wheat | vacuole | 25.0 | 24.38 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 23.86 | 22.28 |
| TraesCS2B01G219900.1 | Wheat | endoplasmic reticulum, extracellular | 22.16 | 21.08 |
| CDY14798 | Canola | extracellular | 1.99 | 5.74 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 |
| PFAM:PF00112 | PFAM:PF08127 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF516 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Propeptide_C1A | SMART:SM00645 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4B01G062400 | EnsemblPlants:TraesCS4B01G062400.1 |
| TIGR:cd02620 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:54036586..54041311
Molecular Weight (calculated)
38226.3 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.189
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVGVSLAL LAAVVLSAAA AAPQLAGAAK AEHSLGIIQK DIIQTVNKHP NAGWTAGHNP YFANYTIEQF KHILGVKPTP PGLLAGVPIQ THPESVDLPK
101: EFDARTQWSS CSTIGNILDQ GHCGACWAFA AVEALQDRFC IHLNMSVTLS VNDLLACCGF LCGSGCNGGY PISAWRYFRR SGIVTEECDP YFDQTGCQHP
201: GCEPAYPTPK CQRKCKVQNQ VWKEKKHFSV NAYRVHSDPH DIMAEVYKNG PVEVAFTVYE DFAHYKSGVY KHITGGVMGG HAVKLIGWGT SDAGEDYWLL
301: ANQWNRGWGD DGYFKIIRGK NECGIEEDVT AGMPSTKNTA RNNDVAFGTA IL
101: EFDARTQWSS CSTIGNILDQ GHCGACWAFA AVEALQDRFC IHLNMSVTLS VNDLLACCGF LCGSGCNGGY PISAWRYFRR SGIVTEECDP YFDQTGCQHP
201: GCEPAYPTPK CQRKCKVQNQ VWKEKKHFSV NAYRVHSDPH DIMAEVYKNG PVEVAFTVYE DFAHYKSGVY KHITGGVMGG HAVKLIGWGT SDAGEDYWLL
301: ANQWNRGWGD DGYFKIIRGK NECGIEEDVT AGMPSTKNTA RNNDVAFGTA IL
001: MADNCIRLLH SASVFFCLGL LISSFNLLQG IAAENLSKQK LTSWILQNEI VKEVNENPNA GWKASFNDRF ANATVAEFKR LLGVKPTPKT EFLGVPIVSH
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
101: DISLKLPKEF DARTAWSQCT SIGRILDQGH CGSCWAFGAV ESLSDRFCIK YNMNVSLSVN DLLACCGFLC GQGCNGGYPI AAWRYFKHHG VVTEECDPYF
201: DNTGCSHPGC EPAYPTPKCA RKCVSGNQLW RESKHYGVSA YKVRSHPDDI MAEVYKNGPV EVAFTVYEDF AHYKSGVYKH ITGTNIGGHA VKLIGWGTSD
301: DGEDYWLLAN QWNRSWGDDG YFKIRRGTNE CGIEHGVVAG LPSDRNVVKG ITTSDDLLVS SF
Arabidopsis Description
CATHB2Cathepsin B-like protease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VC9]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.