Factsheet for GSMUA_Achr3P24740_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06100_001	Banana	vacuole	84.12	82.29
PGSC0003DMT400026850	Potato	extracellular	48.75	70.85
CDY64994	Canola	cytosol, nucleus, vacuole	48.75	70.56
KRG96636	Soybean	nucleus	66.3	66.85
TraesCS4B01G062500.1	Wheat	extracellular	63.79	66.76
KXG36303	Sorghum	vacuole	65.74	66.48
KRH68369	Soybean	nucleus	66.02	66.39
TraesCS4A01G252800.1	Wheat	unclear	63.51	66.28
Solyc02g069090.2.1	Tomato	extracellular	64.9	66.19
TraesCS4D01G061400.1	Wheat	extracellular	63.23	66.18
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	64.9	64.9
TraesCS4A01G252700.1	Wheat	extracellular	62.12	64.64
CDY58223	Canola	vacuole	64.35	64.53
Bra036321.1-P	Field mustard	vacuole	64.07	64.25
CDY07129	Canola	extracellular	64.07	64.25
AT1G02305.1	Thale cress	extracellular, vacuole	64.62	64.09
Bra030498.1-P	Field mustard	vacuole	63.51	63.87
TraesCS4B01G062400.1	Wheat	extracellular	62.12	63.35
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	62.4	63.28
HORVU4Hr1G010300.11	Barley	extracellular	62.12	62.99
TraesCS4A01G252900.1	Wheat	extracellular	61.56	62.96
CDY61859	Canola	extracellular, golgi, vacuole	63.79	62.91
TraesCS4B01G062600.1	Wheat	vacuole	62.67	62.5
CDX85150	Canola	extracellular, golgi, vacuole	58.22	61.29
Solyc02g069100.2.1	Tomato	plastid	59.61	60.45
VIT_07s0005g02820.t01	Wine grape	vacuole	64.62	59.18
AT1G02300.1	Thale cress	extracellular	60.45	57.26
CDY64824	Canola	cytosol, mitochondrion, vacuole	27.3	56.0
HORVU4Hr1G010360.3	Barley	vacuole	62.4	55.72
KRH49642	Soybean	endoplasmic reticulum, extracellular	13.93	52.08
HORVU4Hr1G010390.14	Barley	vacuole	63.23	43.32
CDY38163	Canola	golgi, vacuole	19.22	43.12
Os05t0310500-02	Rice	extracellular	20.61	38.34
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	23.12	36.09
GSMUA_Achr9P16070_001	Banana	extracellular, golgi	19.5	28.34
GSMUA_AchrUn_...	Banana	nucleus, plastid, vacuole	6.96	26.32
Zm00001d022297_P001	Maize	cytosol, extracellular, nucleus	5.29	26.03
GSMUA_Achr3P17220_001	Banana	nucleus	18.94	22.9
GSMUA_Achr1P21910_001	Banana	plasma membrane	22.84	22.59
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	20.61	20.22
GSMUA_Achr6P27980_001	Banana	vacuole	20.89	20.16
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	19.22	19.11
CDY14798	Canola	extracellular	1.39	4.1

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	GO:GO:0050790
EnsemblPlantsGene:GSMUA_Achr3G24740_001	EnsemblPlants:GSMUA_Achr3P24740_001	EnsemblPlants:GSMUA_Achr3T24740_001	UniProt:M0SHJ0	PFAM:PF00112	PFAM:PF08127
PRINTS:PR00705	ScanProsite:PS00639	PANTHER:PTHR12411	PANTHER:PTHR12411:SF516	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Propeptide_C1A	SMART:SM00645	SUPFAM:SSF54001	SignalP:SignalP-noTM
UniParc:UPI000295A5ED	SEG:seg	:	:	:	:

Description

Putative Cathepsin B [Source:GMGC_GENE;Acc:GSMUA_Achr3G24740_001]

Coordinates

chr3:-:25174240..25178306

Molecular Weight (calculated)

39572.3 Da

IEP (calculated)

6.493

GRAVY (calculated)

-0.180

Length

359 amino acids

Sequence
(BLAST)

001: MASPCPLSLL LLVIALASAL HPPQQVFAVK PMPRLRTDSM ILQNSIIQKI NANPNAGWKA SMNSRFENYT IGQFKHILGV KPMPHNEVMD IPTKTYTKSL
101: KLPKQFDART AWPQCSTIGR ILGKLGHCGS CWAFGAVESL SDRFCVHFGM NISLSVNDLL SCCGFMCGDG CDGGYPIRAW RYFVENGVVT DECDPYFDDI
201: GCAHPGCVPL YPTPQCAKKC QVKNLLWDES KHFAVNAYRV KSDPPAIMTE VYTNGPVEVS FTVYEDFAHY KSGVYKHLTG DEIGGHAVKL IGWGTSDEGE
301: DYWLLANQWN RGWGDDGYFK ISRGTNECGI EEDVVAGMPA SKNLIVDYTT SDPKAAASA

Best Arabidopsis Sequence Match ( AT4G01610.2 )
(BLAST)

001: MAVYNTKLCL ASVFLLLGLL LAFDLKGIEA ESLTKQKLDS KILQDEIVKK VNENPNAGWK AAINDRFSNA TVAEFKRLLG VKPTPKKHFL GVPIVSHDPS
101: LKLPKAFDAR TAWPQCTSIG NILGLGHCGS CWAFGAVESL SDRFCIQFGM NISLSVNDLL ACCGFRCGDG CDGGYPIAAW QYFSYSGVVT EECDPYFDNT
201: GCSHPGCEPA YPTPKCSRKC VSDNKLWSES KHYSVSTYTV KSNPQDIMAE VYKNGPVEVS FTVYEDFAHY KSGVYKHITG SNIGGHAVKL IGWGTSSEGE
301: DYWLMANQWN RGWGDDGYFM IRRGTNECGI EDEPVAGLPS SKNVFRVDTG SNDLPVASV

Arabidopsis Description

CATHB3Cathepsin B-like protease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94K85]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.