Factsheet for Zm00001d022297_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, nucleus

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	extracellular, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005828_P003	Maize	cytosol, nucleus, plastid	41.1	9.97
Zm00001d006364_P001	Maize	extracellular	45.21	8.97
Zm00001d020636_P001	Maize	extracellular	43.84	8.89
Zm00001d016446_P001	Maize	extracellular	41.1	8.09
PGSC0003DMT400026850	Potato	extracellular	26.03	7.69
CDY64994	Canola	cytosol, nucleus, vacuole	26.03	7.66
Bra030498.1-P	Field mustard	vacuole	31.51	6.44
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	30.14	6.21
KRG96636	Soybean	nucleus	30.14	6.18
KRH68369	Soybean	nucleus	30.14	6.16
AT1G02305.1	Thale cress	extracellular, vacuole	30.14	6.08
Solyc02g069090.2.1	Tomato	extracellular	28.77	5.97
Bra036321.1-P	Field mustard	vacuole	28.77	5.87
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	28.77	5.85
CDY61859	Canola	extracellular, golgi, vacuole	28.77	5.77
GSMUA_Achr8P06100_001	Banana	vacuole	28.77	5.72
CDY64824	Canola	cytosol, mitochondrion, vacuole	13.7	5.71
VIT_07s0005g02820.t01	Wine grape	vacuole	30.14	5.61
CDY58223	Canola	vacuole	26.03	5.31
CDY07129	Canola	extracellular	26.03	5.31
GSMUA_Achr3P24740_001	Banana	vacuole	26.03	5.29
AT1G02300.1	Thale cress	extracellular	27.4	5.28
CDX85150	Canola	extracellular, golgi, vacuole	23.29	4.99
Zm00001d021615_P002	Maize	extracellular, plasma membrane, vacuole	23.29	4.63
KRH49642	Soybean	endoplasmic reticulum, extracellular	5.48	4.17
Zm00001d020327_P001	Maize	cytosol	8.22	4.0
CDY38163	Canola	golgi, vacuole	8.22	3.75
Zm00001d017233_P001	Maize	cytosol	15.07	3.59
Solyc02g069100.2.1	Tomato	plastid	16.44	3.39
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	9.59	3.04
CDY14798	Canola	extracellular	1.37	0.82

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	UniProt:A0A1D6IKX9	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	ProteinID:ONM60058.1
PFAM:PF00112	ScanProsite:PS00139	PANTHER:PTHR12411	PANTHER:PTHR12411:SF374	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	SUPFAM:SSF54001	UniParc:UPI00084429A4	EnsemblPlantsGene:Zm00001d022297	EnsemblPlants:Zm00001d022297_P001
EnsemblPlants:Zm00001d022297_T001	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:174720313..174721162

Molecular Weight (calculated)

8011.5 Da

IEP (calculated)

4.825

GRAVY (calculated)

-0.188

Length

73 amino acids

Sequence
(BLAST)

1: MLPTFVNWST YGAVTPIQDQ GDCGSCWAFG VTGLIEAAHF IRNKELIKLS EQHLIDGNNL GNLDANMDHA PRP

Best Arabidopsis Sequence Match ( AT4G16190.1 )
(BLAST)

001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK

Arabidopsis Description

RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.