Factsheet for TraesCS4B01G062600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G252700.1	Wheat	extracellular	92.5	96.52
TraesCS4B01G062500.1	Wheat	extracellular	83.89	88.05
HORVU4Hr1G010360.3	Barley	vacuole	91.67	82.09
TraesCS4B01G062400.1	Wheat	extracellular	76.67	78.41
KXG36303	Sorghum	vacuole	74.17	75.21
CDY64994	Canola	cytosol, nucleus, vacuole	46.67	67.74
Zm00001d021615_P002	Maize	extracellular, plasma membrane, vacuole	67.5	66.21
KRG96636	Soybean	nucleus	62.22	62.92
GSMUA_Achr3P24740_001	Banana	vacuole	62.5	62.67
PGSC0003DMT400026850	Potato	extracellular	42.78	62.35
KRH68369	Soybean	nucleus	61.67	62.18
GSMUA_Achr8P06100_001	Banana	vacuole	62.5	61.31
Bra030498.1-P	Field mustard	vacuole	59.72	60.22
Solyc02g069090.2.1	Tomato	extracellular	58.61	59.94
Bra036321.1-P	Field mustard	vacuole	59.17	59.5
AT1G02305.1	Thale cress	extracellular, vacuole	59.72	59.39
AT4G01610.1	Thale cress	extracellular, golgi, vacuole	58.89	59.05
CDY58223	Canola	vacuole	58.61	58.94
CDY61859	Canola	extracellular, golgi, vacuole	59.17	58.52
CDY07129	Canola	extracellular	58.06	58.38
CDX85150	Canola	extracellular, golgi, vacuole	55.0	58.06
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	54.72	55.65
AT1G02300.1	Thale cress	extracellular	57.22	54.35
VIT_07s0005g02820.t01	Wine grape	vacuole	57.22	52.55
Solyc02g069100.2.1	Tomato	plastid	51.67	52.54
KRH49642	Soybean	endoplasmic reticulum, extracellular	13.89	52.08
CDY64824	Canola	cytosol, mitochondrion, vacuole	25.28	52.0
Os05t0310500-02	Rice	extracellular	22.5	41.97
CDY38163	Canola	golgi, vacuole	18.06	40.62
Bra039903.1-P	Field mustard	extracellular, golgi, vacuole	21.11	33.04
TraesCS5B01G208100.1	Wheat	vacuole	22.22	22.16
TraesCS5B01G326500.1	Wheat	extracellular	20.56	19.63
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	19.72	19.19
CDY14798	Canola	extracellular	1.94	5.74

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	GO:GO:0050790
PFAM:PF00112	PFAM:PF08127	PRINTS:PR00705	ScanProsite:PS00139	PANTHER:PTHR12411	PANTHER:PTHR12411:SF516
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_cys_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Propeptide_C1A	SMART:SM00645
SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G062600	EnsemblPlants:TraesCS4B01G062600.1	TIGR:cd02620	SEG:seg

Description

No Description!

Coordinates

chr4B:-:54346238..54350496

Molecular Weight (calculated)

39047.3 Da

IEP (calculated)

5.875

GRAVY (calculated)

-0.146

Length

360 amino acids

Sequence
(BLAST)

001: MGRLLPLALL VLLSAAAAAP QLVGAARGDH SLPIIQLAGA AKAEHSLGII QKDIIQTVNK HPNAGWTAGH NPYLANYTIE QFKHILGVKP TPPGLLAGVP
101: TKTYSTSEKE DLPKEFDARS KWSGCSTIGK ILDQGHCGAC WAFGAVECLQ DRFCIHHGVN VSLSVNDIVA CCGFLCGDGC EGGYPIFAWQ YFVENGVVTD
201: ECDPFFDQVG CQHPGCEPAY PTPVCEKKCK VQNQVWEEKK HFSIDAYQVN SDPHDIMAEV YKNGPVEVSF IIYEDFAHYK SGVYKQITGR MVGGHAAKLI
301: GWGTSDAGED YWLLANQWNR GWGDDGYFKV IRGTNECGIE GDVNAGMPST KNIAGSAFAM

Best Arabidopsis Sequence Match ( AT1G02300.1 )
(BLAST)

001: MADSCCIRLH LLASVFLLLF SSFNLQGIAA ENLSKQKLTS LILQNEIVKE VNENPNAGWK AAFNDRFANA TVAEFKRLLG VIQTPKTAYL GVPIVRHDLS
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV

Arabidopsis Description

CATHB1Cathepsin B-like protease 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HVZ1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.