Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G252700.1 | Wheat | extracellular | 82.84 | 96.52 |
| TraesCS4B01G062600.1 | Wheat | vacuole | 82.09 | 91.67 |
| HORVU4Hr1G010300.11 | Barley | extracellular | 66.92 | 75.99 |
| KXG36303 | Sorghum | vacuole | 66.92 | 75.77 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 41.54 | 67.34 |
| Zm00001d021615_P002 | Maize | extracellular, plasma membrane, vacuole | 61.44 | 67.3 |
| KRG96636 | Soybean | nucleus | 56.47 | 63.76 |
| KRH68369 | Soybean | nucleus | 55.47 | 62.47 |
| GSMUA_Achr3P24740_001 | Banana | vacuole | 55.72 | 62.4 |
| PGSC0003DMT400026850 | Potato | extracellular | 38.06 | 61.94 |
| GSMUA_Achr8P06100_001 | Banana | vacuole | 55.97 | 61.31 |
| HORVU4Hr1G010390.14 | Barley | vacuole | 78.11 | 59.92 |
| Bra030498.1-P | Field mustard | vacuole | 52.99 | 59.66 |
| Solyc02g069090.2.1 | Tomato | extracellular | 52.24 | 59.66 |
| Bra036321.1-P | Field mustard | vacuole | 52.99 | 59.5 |
| CDY58223 | Canola | vacuole | 52.49 | 58.94 |
| AT1G02305.1 | Thale cress | extracellular, vacuole | 52.99 | 58.84 |
| AT4G01610.1 | Thale cress | extracellular, golgi, vacuole | 52.49 | 58.77 |
| CDY07129 | Canola | extracellular | 51.99 | 58.38 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 52.49 | 57.97 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 48.76 | 57.48 |
| Solyc02g069110.2.1 | Tomato | extracellular, golgi, vacuole | 49.01 | 55.65 |
| AT1G02300.1 | Thale cress | extracellular | 50.5 | 53.56 |
| Solyc02g069100.2.1 | Tomato | plastid | 46.52 | 52.82 |
| VIT_07s0005g02820.t01 | Wine grape | vacuole | 51.24 | 52.55 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 22.64 | 52.0 |
| KRH49642 | Soybean | endoplasmic reticulum, extracellular | 11.69 | 48.96 |
| Os05t0310500-02 | Rice | extracellular | 20.4 | 42.49 |
| CDY38163 | Canola | golgi, vacuole | 15.67 | 39.38 |
| Bra039903.1-P | Field mustard | extracellular, golgi, vacuole | 18.91 | 33.04 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 15.17 | 24.6 |
| HORVU5Hr1G061770.1 | Barley | extracellular, golgi, vacuole | 20.9 | 23.2 |
| HORVU7Hr1G074340.1 | Barley | plastid | 13.93 | 23.14 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 14.93 | 22.9 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 18.91 | 20.16 |
| HORVU2Hr1G036930.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 18.16 | 18.34 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 15.67 | 16.67 |
| CDY14798 | Canola | extracellular | 1.99 | 6.56 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | UniProt:A0A287N6I6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0050790 | EnsemblPlantsGene:HORVU4Hr1G010360 | EnsemblPlants:HORVU4Hr1G010360.3 |
| PFAM:PF00112 | PFAM:PF08127 | PRINTS:PR00705 | ScanProsite:PS00139 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF516 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Propeptide_C1A | SMART:SM00645 |
| SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI000B487499 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr4H:+:30932140..30937372
Molecular Weight (calculated)
43472.8 Da
IEP (calculated)
5.891
GRAVY (calculated)
-0.197
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: PPPEETNLAA CLLLDAHSSP LLQLLLLPCL KGGLGEKEEQ GRRLQPLPCR RSRKEMGGLL PLALLVVLSA AAAAAAPQLV GAARGDHSLP IIQEDIIRTV
101: NSHPNAGWTA GHNPYLANYT IEQFKHILGV KPTPPGLLAG VPTKTYSRSE KEELPKEFDA RSKWSGCSTI GKILDQGHCG ACWAFGAVEC LQDRFCIHHS
201: VNVSLSVNDL VACCGFLCGD GCDGGYPIFA WQYFVENGVV TDECDPFFDQ VGCQHPGCEP AYPTPVCEKK CKVQNQVWEE KKHFSIDAYQ VNSDPHDIMA
301: EVYKNGPVEV SFIIYEDFAH YKSGVYKQIT GRMVGGHAAK LIGWGTSDAG EDXXLLANQW NRGWGDDGYF KIIRGTNECG IEGDVNAGMP STKNIAGRAF
401: AI
101: NSHPNAGWTA GHNPYLANYT IEQFKHILGV KPTPPGLLAG VPTKTYSRSE KEELPKEFDA RSKWSGCSTI GKILDQGHCG ACWAFGAVEC LQDRFCIHHS
201: VNVSLSVNDL VACCGFLCGD GCDGGYPIFA WQYFVENGVV TDECDPFFDQ VGCQHPGCEP AYPTPVCEKK CKVQNQVWEE KKHFSIDAYQ VNSDPHDIMA
301: EVYKNGPVEV SFIIYEDFAH YKSGVYKQIT GRMVGGHAAK LIGWGTSDAG EDXXLLANQW NRGWGDDGYF KIIRGTNECG IEGDVNAGMP STKNIAGRAF
401: AI
001: MADSCCIRLH LLASVFLLLF SSFNLQGIAA ENLSKQKLTS LILQNEIVKE VNENPNAGWK AAFNDRFANA TVAEFKRLLG VIQTPKTAYL GVPIVRHDLS
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV
101: LKLPKEFDAR TAWSHCTSIR RILVGYILNN VLLWSTITLW FWFLLGHCGS CWAFGAVESL SDRFCIKYNL NVSLSANDVI ACCGLLCGFG CNGGFPMGAW
201: LYFKYHGVVT QECDPYFDNT GCSHPGCEPT YPTPKCERKC VSRNQLWGES KHYGVGAYRI NPDPQDIMAE VYKNGPVEVA FTVYEDFAHY KSGVYKYITG
301: TKIGGHAVKL IGWGTSDDGE DYWLLANQWN RSWGDDGYFK IRRGTNECGI EQSVVAGLPS EKNVFKGITT SDDLLVSSV
Arabidopsis Description
CATHB1Cathepsin B-like protease 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HVZ1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.