Factsheet for HORVU5Hr1G082810.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G326500.1	Wheat	extracellular	96.55	96.55
TraesCS5A01G326100.1	Wheat	golgi	96.55	96.55
TraesCS5D01G332200.1	Wheat	extracellular	96.29	96.29
HORVU7Hr1G069280.1	Barley	nucleus	61.27	93.15
HORVU7Hr1G074340.1	Barley	plastid	56.23	87.6
Os02t0469600-01	Rice	extracellular	85.41	86.33
HORVU4Hr1G082210.1	Barley	cytosol, mitochondrion, nucleus, plastid	59.42	85.5
Zm00001d016446_P001	Maize	extracellular	82.23	83.56
EES05034	Sorghum	endoplasmic reticulum	80.11	81.4
GSMUA_Achr3P17220_001	Banana	nucleus	58.62	74.41
GSMUA_Achr6P21090_001	Banana	endoplasmic reticulum	69.76	71.86
GSMUA_Achr6P27980_001	Banana	vacuole	68.97	69.89
PGSC0003DMT400009507	Potato	extracellular	64.19	66.67
KRH51767	Soybean	endoplasmic reticulum	64.46	66.39
KRH61087	Soybean	endoplasmic reticulum	64.46	66.39
KRH05898	Soybean	endoplasmic reticulum, vacuole	64.19	65.41
VIT_04s0023g02450.t01	Wine grape	vacuole	63.66	65.4
KRH17382	Soybean	endoplasmic reticulum	63.4	65.12
Solyc04g080960.2.1	Tomato	extracellular	62.33	64.74
HORVU2Hr1G066680.1	Barley	endoplasmic reticulum	64.72	64.55
VIT_18s0001g13400.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	63.13	64.15
VIT_18s0001g13380.t01	Wine grape	extracellular	62.07	64.11
VIT_18s0001g13390.t01	Wine grape	endoplasmic reticulum	62.33	63.86
CDY32227	Canola	endoplasmic reticulum, extracellular, vacuole	62.33	63.86
Bra033545.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	62.33	63.86
CDY34441	Canola	endoplasmic reticulum	62.07	63.59
AT4G16190.1	Thale cress	endoplasmic reticulum, extracellular	60.21	60.86
CDX90537	Canola	endoplasmic reticulum	58.89	60.66
CDY09707	Canola	endoplasmic reticulum, extracellular	58.36	60.11
Bra012733.1-P	Field mustard	endoplasmic reticulum	58.62	60.05
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	52.25	49.5
KRH49717	Soybean	endoplasmic reticulum	22.55	48.3
HORVU5Hr1G061770.1	Barley	extracellular, golgi, vacuole	32.1	33.43
HORVU4Hr1G010300.11	Barley	extracellular	21.75	23.16
HORVU4Hr1G010360.3	Barley	vacuole	20.16	18.91
HORVU4Hr1G010390.14	Barley	vacuole	21.49	15.46

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EMBL:AK361896	EMBL:AK362853	MEROPS:C01.022	UniProt:F2DDC9
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G082810	EnsemblPlants:HORVU5Hr1G082810.1	PFAM:PF00112
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF338	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM
UniParc:UPI00001D9639	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DDC9]

Coordinates

chrchr5H:+:568482990..568486079

Molecular Weight (calculated)

41018.3 Da

IEP (calculated)

6.133

GRAVY (calculated)

-0.350

Length

377 amino acids

Sequence
(BLAST)

001: MDHRLVAPLL LLVGLLLSPA PATAAAGDEE PLIRQVVGGA DPLDNDLELD SQFVGFVQRF GKTYRDAEEH AHRLSVFKAN LRRARRHQLL DPSAEHGVTK
101: FSDLTPAEFR RTYLGLKTTR RSFLREMAGS AHDAPVLPTD GLPEDFDWRD HGAVGPVKNQ GSCGSCWSFS ASGALEGANY LASGKMEVLS EQQLVDCDHE
201: CDPSEPDSCD AGCNGGLMTS AFSYLLKSGG LEREKDYPYT GKDGTCKFDK SKIAASVQNY SVVAVDEEQI AANLVKYGPL AIGINAAYMQ TYIGGVSCPY
301: ICGRHLDHGV LLVGYGASGF APSRFKEKPY WIIKNSWGEN WGDKGYYKIC RGSNVRNKCG VDSMVSTVSA THSSKEE

Best Arabidopsis Sequence Match ( AT4G39090.1 )
(BLAST)

001: MDRLKLYFSV FVLSFFIVSV SSSDVNDGDD LVIRQVVGGA EPQVLTSEDH FSLFKRKFGK VYASNEEHDY RFSVFKANLR RARRHQKLDP SATHGVTQFS
101: DLTRSEFRKK HLGVRSGFKL PKDANKAPIL PTENLPEDFD WRDHGAVTPV KNQGSCGSCW SFSATGALEG ANFLATGKLV SLSEQQLVDC DHECDPEEAD
201: SCDSGCNGGL MNSAFEYTLK TGGLMKEEDY PYTGKDGKTC KLDKSKIVAS VSNFSVISID EEQIAANLVK NGPLAVAINA GYMQTYIGGV SCPYICTRRL
301: NHGVLLVGYG AAGYAPARFK EKPYWIIKNS WGETWGENGF YKICKGRNIC GVDSMVSTVA ATVSTTAH

Arabidopsis Description

RD19ARD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.