Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 98.1 | 98.1 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 86.41 | 85.25 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 82.07 | 82.51 |
| CDX90537 | Canola | endoplasmic reticulum | 80.71 | 81.15 |
| KRH61087 | Soybean | endoplasmic reticulum | 74.18 | 74.59 |
| KRH51767 | Soybean | endoplasmic reticulum | 73.37 | 73.77 |
| PGSC0003DMT400009507 | Potato | extracellular | 72.01 | 73.0 |
| Solyc04g080960.2.1 | Tomato | extracellular | 70.92 | 71.9 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 70.38 | 70.57 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 70.11 | 69.73 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 70.11 | 69.54 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.29 | 69.48 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 55.98 | 69.36 |
| KRH17382 | Soybean | endoplasmic reticulum | 69.02 | 69.21 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 64.4 | 69.1 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 68.48 | 69.04 |
| CDX90310 | Canola | vacuole | 68.21 | 68.02 |
| CDY71205 | Canola | vacuole | 67.93 | 67.93 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 67.66 | 67.66 |
| CDY15894 | Canola | endoplasmic reticulum | 66.03 | 67.13 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 66.85 | 66.13 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 65.76 | 66.12 |
| EES05034 | Sorghum | endoplasmic reticulum | 66.58 | 66.04 |
| Zm00001d016446_P001 | Maize | extracellular | 66.3 | 65.77 |
| Os02t0469600-01 | Rice | extracellular | 66.03 | 65.15 |
| CDY13816 | Canola | cytosol | 50.0 | 65.02 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 43.75 | 64.92 |
| HORVU7Hr1G074340.1 | Barley | plastid | 41.85 | 63.64 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 63.59 | 62.07 |
| TraesCS2A01G273100.1 | Wheat | golgi | 63.86 | 62.01 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 56.79 | 61.83 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 61.14 | 61.31 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 62.77 | 61.27 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 62.77 | 61.27 |
| TraesCS5A01G326100.1 | Wheat | golgi | 62.77 | 61.27 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 43.48 | 61.07 |
| CDX82031 | Canola | nucleus | 39.67 | 55.09 |
| KRH49717 | Soybean | endoplasmic reticulum | 25.27 | 52.84 |
| CDY56961 | Canola | endoplasmic reticulum | 51.9 | 52.47 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 53.8 | 52.38 |
| CDX73424 | Canola | extracellular | 51.63 | 52.2 |
| CDY42605 | Canola | plastid | 29.62 | 51.42 |
| Os04t0311400-01 | Rice | nucleus | 50.54 | 48.44 |
| CDY14798 | Canola | extracellular | 13.86 | 41.8 |
| CDY09216 | Canola | vacuole | 36.68 | 37.6 |
| CDY09213 | Canola | vacuole | 36.41 | 37.33 |
| CDX80173 | Canola | endoplasmic reticulum | 35.33 | 36.31 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 23.64 | 36.25 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.05 | 35.93 |
| CDX88753 | Canola | vacuole | 32.34 | 34.1 |
| CDX71035 | Canola | vacuole | 27.45 | 29.45 |
| CDX71045 | Canola | endoplasmic reticulum | 28.8 | 29.28 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 17.66 | 26.21 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 21.2 | 22.87 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 22.01 | 22.25 |
| CDY58223 | Canola | vacuole | 20.92 | 21.51 |
| CDY07129 | Canola | extracellular | 20.65 | 21.23 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 21.74 | 19.56 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 7.61 | 16.0 |
| CDY38163 | Canola | golgi, vacuole | 6.79 | 15.62 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078H9L4 | UniProt:A0A078H9L4 | MEROPS:C01.A06 | EnsemblPlants:CDY34441 |
| ProteinID:CDY34441 | ProteinID:CDY34441.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00056529001 |
| PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0004EEB378 | SEG:seg | : | : | : | : |
Description
BnaC01g21920DBnaC01g21920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9L4]
Coordinates
chrLK032334:+:145918..148160
Molecular Weight (calculated)
40828.3 Da
IEP (calculated)
6.865
GRAVY (calculated)
-0.313
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRVIFFLLV AAALLVAITG EVVEDSFDNP IIRQVVPEEN DEQLLNAEHH FSLFKSKYDK TYATQAEHDH RFRVFKANLR RARRHQLLDP SAVHGVTQFS
101: DLTPKEFRRK YLGLKRKLRL PSDAQKAPIL PTSDLPTDFD WRDQGAVTRV KNQGSCGSCW SFSATGALEG AHFLATKELV SLSEQQLVDC DHECDPEEAN
201: SCDSGCGGGL MNNAFEYTLK AGGLMKESDY PYTGHDNSGC KFDKSMIAAR VSNFSVVSAD EDQIAANLVH HGPLAIAINA MWMQTYIGGV SCPYICSKSQ
301: DHGVLLVGFG SSGYAPIRLK EKPYWIIKNS WGSTWGEDGY YKICRGRHNI CGMDTMVSTV AAVHTSTR
101: DLTPKEFRRK YLGLKRKLRL PSDAQKAPIL PTSDLPTDFD WRDQGAVTRV KNQGSCGSCW SFSATGALEG AHFLATKELV SLSEQQLVDC DHECDPEEAN
201: SCDSGCGGGL MNNAFEYTLK AGGLMKESDY PYTGHDNSGC KFDKSMIAAR VSNFSVVSAD EDQIAANLVH HGPLAIAINA MWMQTYIGGV SCPYICSKSQ
301: DHGVLLVGFG SSGYAPIRLK EKPYWIIKNS WGSTWGEDGY YKICRGRHNI CGMDTMVSTV AAVHTSTR
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
Arabidopsis Description
RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.