Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031189.1-P | Field mustard | nucleus | 95.76 | 86.31 |
| CDX82031 | Canola | nucleus | 73.5 | 78.49 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 78.09 | 64.43 |
| CDY15894 | Canola | endoplasmic reticulum | 78.09 | 61.05 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 77.03 | 60.39 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 75.27 | 58.04 |
| CDX90310 | Canola | vacuole | 73.85 | 56.64 |
| CDY71205 | Canola | vacuole | 73.5 | 56.52 |
| KRH29385 | Soybean | extracellular | 69.96 | 54.55 |
| KRH24406 | Soybean | extracellular | 69.61 | 53.97 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 68.2 | 52.3 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 67.49 | 51.9 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 68.9 | 51.72 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.02 | 50.0 |
| CDY34441 | Canola | endoplasmic reticulum | 65.02 | 50.0 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 60.42 | 46.72 |
| CDX90537 | Canola | endoplasmic reticulum | 60.42 | 46.72 |
| CDY56961 | Canola | endoplasmic reticulum | 54.77 | 42.58 |
| CDX73424 | Canola | extracellular | 54.06 | 42.03 |
| CDY42605 | Canola | plastid | 30.04 | 40.09 |
| CDY09216 | Canola | vacuole | 39.58 | 31.2 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.22 | 30.92 |
| CDY09213 | Canola | vacuole | 39.22 | 30.92 |
| CDX80173 | Canola | endoplasmic reticulum | 38.87 | 30.73 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 25.8 | 30.42 |
| CDY14798 | Canola | extracellular | 11.66 | 27.05 |
| CDX88753 | Canola | vacuole | 32.16 | 26.07 |
| CDX71035 | Canola | vacuole | 29.68 | 24.49 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 20.85 | 23.79 |
| CDX71045 | Canola | endoplasmic reticulum | 28.98 | 22.65 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 21.91 | 18.18 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 22.97 | 17.86 |
| CDY07129 | Canola | extracellular | 21.55 | 17.04 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 24.38 | 16.87 |
| CDY58223 | Canola | vacuole | 21.2 | 16.76 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 8.13 | 13.14 |
| CDY38163 | Canola | golgi, vacuole | 4.59 | 8.12 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078FKZ4 | UniProt:A0A078FKZ4 | EnsemblPlants:CDY13816 | ProteinID:CDY13816 |
| ProteinID:CDY13816.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00078258001 | PFAM:PF00112 | PRINTS:PR00705 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | SMART:SM00645 | SUPFAM:SSF54001 | UniParc:UPI0004EDC61B |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g43180DBnaA09g43180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKZ4]
Coordinates
chrLK032038:+:508337..512397
Molecular Weight (calculated)
31312.0 Da
IEP (calculated)
7.542
GRAVY (calculated)
-0.290
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWEDHFTLF KRRYGKVYNS HEEHQHRFWI FRSNFMRATR HQRMDPFARH GHADQAPILD AKNLPGDFDW RDRGAVTPVK NQGACGSSWS FSTTGALEGA
101: HFLATGKLVI ISVLGSVHCD PEVEGLCDSG CNGGLMNIAS EYTFETGGLM REEDYPYTGT TDGDGICKLD KSKIVASVFN FSVVSSNEDQ IAAHLVKNGP
201: LAVAINSAYM KTYVGGVLCP YMCSRSLNHG VLLVGYGSEG SRFKEKPHWI IKNSWGETWG ESGFFKLCKG RNICGFGSLV STV
101: HFLATGKLVI ISVLGSVHCD PEVEGLCDSG CNGGLMNIAS EYTFETGGLM REEDYPYTGT TDGDGICKLD KSKIVASVFN FSVVSSNEDQ IAAHLVKNGP
201: LAVAINSAYM KTYVGGVLCP YMCSRSLNHG VLLVGYGSEG SRFKEKPHWI IKNSWGETWG ESGFFKLCKG RNICGFGSLV STV
001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
Arabidopsis Description
RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.