Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15894 | Canola | endoplasmic reticulum | 96.79 | 91.71 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 86.88 | 82.55 |
| CDY13816 | Canola | cytosol | 64.43 | 78.09 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 81.92 | 76.57 |
| CDX90310 | Canola | vacuole | 81.34 | 75.61 |
| CDY71205 | Canola | vacuole | 80.47 | 75.0 |
| KRH29385 | Soybean | extracellular | 73.18 | 69.15 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.05 | 69.02 |
| KRH24406 | Soybean | extracellular | 73.18 | 68.77 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 75.51 | 68.7 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 72.89 | 67.75 |
| CDX82031 | Canola | nucleus | 51.6 | 66.79 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.39 | 64.67 |
| CDY34441 | Canola | endoplasmic reticulum | 69.1 | 64.4 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 64.43 | 60.38 |
| CDX90537 | Canola | endoplasmic reticulum | 64.43 | 60.38 |
| CDY42605 | Canola | plastid | 33.24 | 53.77 |
| CDY56961 | Canola | endoplasmic reticulum | 54.23 | 51.1 |
| CDX73424 | Canola | extracellular | 54.23 | 51.1 |
| CDY14798 | Canola | extracellular | 14.29 | 40.16 |
| CDY09216 | Canola | vacuole | 37.61 | 35.93 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 25.07 | 35.83 |
| CDY09213 | Canola | vacuole | 37.32 | 35.65 |
| CDX80173 | Canola | endoplasmic reticulum | 36.73 | 35.2 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.15 | 34.54 |
| CDX88753 | Canola | vacuole | 32.07 | 31.52 |
| CDX71035 | Canola | vacuole | 29.15 | 29.15 |
| CDX71045 | Canola | endoplasmic reticulum | 28.28 | 26.8 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 18.66 | 25.81 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 22.74 | 22.87 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 23.62 | 22.25 |
| CDY07129 | Canola | extracellular | 21.57 | 20.67 |
| CDY58223 | Canola | vacuole | 21.28 | 20.39 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 22.74 | 19.07 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 9.33 | 18.29 |
| CDY38163 | Canola | golgi, vacuole | 7.29 | 15.62 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078EJU4 | MEROPS:C01.A04 | EnsemblPlants:CDX99593 | ProteinID:CDX99593 |
| ProteinID:CDX99593.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00108091001 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | TMHMM:TMhelix | UniParc:UPI0004EE8C65 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g33500D
Coordinates
chrLK031912:+:197222..198901
Molecular Weight (calculated)
37797.9 Da
IEP (calculated)
7.460
GRAVY (calculated)
-0.224
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHLRVLFSV SLLFAFFVSL SFCIVIGGDH FSLFKRRFGK VYGSLEEHHH RFAVFRSNLQ RAMRHQRMDP SARHGVTQFS DLTPSEFRRM HLGVRGGFKL
101: PKDANQAPIL PTKDLPEDFD WRDRGAVTPV KNQGSCGSCW SFSTTGALEG AHFLSTGQLV SLSEQQLVDC DHECDPEQEG SCDSGCNGGL MNSAFEYTLK
201: TGGLMREDDY PYEGTDGGTC KLDKSKIVAS VSNFSVVSIN EDQIAANLVK NGPLAVALNA AYMQTYMGGV SCPYICSKRL NHGVLLVGYG SAGFSQARFK
301: EKPYWIIKNS WGETWGENGF YKLCKGRNVC GVDSMVSTVA AAV
101: PKDANQAPIL PTKDLPEDFD WRDRGAVTPV KNQGSCGSCW SFSTTGALEG AHFLSTGQLV SLSEQQLVDC DHECDPEQEG SCDSGCNGGL MNSAFEYTLK
201: TGGLMREDDY PYEGTDGGTC KLDKSKIVAS VSNFSVVSIN EDQIAANLVK NGPLAVALNA AYMQTYMGGV SCPYICSKRL NHGVLLVGYG SAGFSQARFK
301: EKPYWIIKNS WGETWGENGF YKLCKGRNVC GVDSMVSTVA AAV
001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
Arabidopsis Description
RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.