Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030299.1-P | Field mustard | endoplasmic reticulum | 99.45 | 99.45 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 91.71 | 96.79 |
| AT2G21430.1 | Thale cress | endoplasmic reticulum | 86.46 | 86.7 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 80.94 | 79.84 |
| CDX90310 | Canola | vacuole | 80.11 | 78.59 |
| CDY71205 | Canola | vacuole | 79.56 | 78.26 |
| CDY13816 | Canola | cytosol | 61.05 | 78.09 |
| PGSC0003DMT400079506 | Potato | endoplasmic reticulum, extracellular, vacuole | 71.55 | 70.38 |
| VIT_03s0038g00280.t01 | Wine grape | endoplasmic reticulum | 73.2 | 70.29 |
| KRH29385 | Soybean | extracellular | 70.17 | 69.97 |
| KRH24406 | Soybean | extracellular | 70.44 | 69.86 |
| Solyc01g110110.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 70.99 | 69.65 |
| CDX82031 | Canola | nucleus | 48.9 | 66.79 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 67.4 | 66.3 |
| CDY34441 | Canola | endoplasmic reticulum | 67.13 | 66.03 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 62.15 | 61.48 |
| CDX90537 | Canola | endoplasmic reticulum | 61.88 | 61.2 |
| CDY42605 | Canola | plastid | 31.77 | 54.25 |
| CDX73424 | Canola | extracellular | 52.49 | 52.2 |
| CDY56961 | Canola | endoplasmic reticulum | 52.49 | 52.2 |
| CDY14798 | Canola | extracellular | 16.57 | 49.18 |
| CDY09216 | Canola | vacuole | 37.85 | 38.16 |
| CDY09213 | Canola | vacuole | 37.57 | 37.88 |
| CDX80173 | Canola | endoplasmic reticulum | 37.02 | 37.43 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 36.46 | 36.77 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 23.76 | 35.83 |
| CDX88753 | Canola | vacuole | 32.04 | 33.24 |
| CDX71035 | Canola | vacuole | 29.01 | 30.61 |
| CDX71045 | Canola | endoplasmic reticulum | 28.18 | 28.18 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 17.96 | 26.21 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 21.55 | 22.87 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 22.38 | 22.25 |
| CDY07129 | Canola | extracellular | 20.72 | 20.95 |
| CDY58223 | Canola | vacuole | 20.44 | 20.67 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 22.93 | 20.29 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 8.84 | 18.29 |
| CDY38163 | Canola | golgi, vacuole | 6.63 | 15.0 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078FSK5 | UniProt:A0A078FSK5 | MEROPS:C01.A04 | EnsemblPlants:CDY15894 |
| ProteinID:CDY15894 | ProteinID:CDY15894.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00090254001 |
| PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 |
| PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS |
| InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 |
| SignalP:SignalP-noTM | UniParc:UPI0004EDB974 | SEG:seg | : | : | : |
Description
BnaA04g12170DBnaA04g12170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSK5]
Coordinates
chrLK032059:+:336225..337599
Molecular Weight (calculated)
39900.3 Da
IEP (calculated)
7.437
GRAVY (calculated)
-0.268
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHLRVLFSV SLLFAFFVSV SFCENNGEDI LIRQVVNGSE PKVLSSEDHF SLFKRRFGKV YGSLEEHRHR FAVFRSNLQR AMRHQKMDPS ARHGVTQFSD
101: LTPSEFRRMH LGVRGGFKLP KDANQAPILP TKDLPVDFDW RDRGAVTPVK NQGSCGSCWS FSTTGALEGA HFLSTGQLVS LSEQQLVDCD HECDPEQEGS
201: CDSGCNGGLM NSAFEYTLKT GGLMREDDYP YTGTDGGTCK LDKSKIVASV SNFSVVSINE DQIAANLVRN GPLAVALNAA YMQTYMGGVS CPYICSKRLN
301: HGVLLVGYGS AGFSQARFKE KPYWIIKNSW GETWGENGFY KLCKGRNVCG IDSMVSTVAA AA
101: LTPSEFRRMH LGVRGGFKLP KDANQAPILP TKDLPVDFDW RDRGAVTPVK NQGSCGSCWS FSTTGALEGA HFLSTGQLVS LSEQQLVDCD HECDPEQEGS
201: CDSGCNGGLM NSAFEYTLKT GGLMREDDYP YTGTDGGTCK LDKSKIVASV SNFSVVSINE DQIAANLVRN GPLAVALNAA YMQTYMGGVS CPYICSKRLN
301: HGVLLVGYGS AGFSQARFKE KPYWIIKNSW GETWGENGFY KLCKGRNVCG IDSMVSTVAA AA
001: MDYHLRVLFS VSLIFVFVSV SVCGDEDVLI RQVVDETEPK VLSSEDHFTL FKKKFGKVYG SIEEHYYRFS VFKANLLRAM RHQKMDPSAR HGVTQFSDLT
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
101: RSEFRRKHLG VKGGFKLPKD ANQAPILPTQ NLPEEFDWRD RGAVTPVKNQ GSCGSCWSFS TTGALEGAHF LATGKLVSLS EQQLVDCDHE CDPEEEGSCD
201: SGCNGGLMNS AFEYTLKTGG LMREKDYPYT GTDGGSCKLD RSKIVASVSN FSVVSINEDQ IAANLIKNGP LAVAINAAYM QTYIGGVSCP YICSRRLNHG
301: VLLVGYGSAG FSQARLKEKP YWIIKNSWGE SWGENGFYKI CKGRNICGVD SLVSTVAATT S
Arabidopsis Description
RD19BProbable cysteine protease RD19B [Source:UniProtKB/Swiss-Prot;Acc:P43295]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.