Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012733.1-P | Field mustard | endoplasmic reticulum | 98.63 | 98.1 |
| CDY09707 | Canola | endoplasmic reticulum, extracellular | 96.17 | 96.17 |
| CDY32227 | Canola | endoplasmic reticulum, extracellular, vacuole | 81.97 | 81.52 |
| CDY34441 | Canola | endoplasmic reticulum | 81.15 | 80.71 |
| AT4G16190.1 | Thale cress | endoplasmic reticulum, extracellular | 82.24 | 80.7 |
| VIT_18s0001g13400.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 68.31 | 67.39 |
| PGSC0003DMT400009507 | Potato | extracellular | 66.39 | 66.94 |
| KRH61087 | Soybean | endoplasmic reticulum | 66.39 | 66.39 |
| VIT_04s0023g02450.t01 | Wine grape | vacuole | 66.39 | 66.21 |
| KRH51767 | Soybean | endoplasmic reticulum | 66.12 | 66.12 |
| Solyc04g080960.2.1 | Tomato | extracellular | 65.57 | 66.12 |
| VIT_18s0001g13390.t01 | Wine grape | endoplasmic reticulum | 66.39 | 66.03 |
| GSMUA_Achr3P17220_001 | Banana | nucleus | 53.55 | 65.99 |
| CDY41960 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.57 | 65.4 |
| CDX90310 | Canola | vacuole | 65.57 | 65.04 |
| CDY71205 | Canola | vacuole | 65.03 | 64.67 |
| CDX99593 | Canola | endoplasmic reticulum, golgi | 60.38 | 64.43 |
| KRH05898 | Soybean | endoplasmic reticulum, vacuole | 64.75 | 64.05 |
| KRH17382 | Soybean | endoplasmic reticulum | 64.21 | 64.03 |
| VIT_18s0001g13380.t01 | Wine grape | extracellular | 63.39 | 63.56 |
| GSMUA_Achr6P27980_001 | Banana | vacuole | 63.11 | 62.1 |
| CDY15894 | Canola | endoplasmic reticulum | 61.2 | 61.88 |
| GSMUA_Achr6P21090_001 | Banana | endoplasmic reticulum | 61.48 | 61.48 |
| HORVU7Hr1G069280.1 | Barley | nucleus | 41.53 | 61.29 |
| CDY13816 | Canola | cytosol | 46.72 | 60.42 |
| Os02t0469600-01 | Rice | extracellular | 61.48 | 60.32 |
| EES05034 | Sorghum | endoplasmic reticulum | 60.66 | 59.84 |
| Zm00001d016446_P001 | Maize | extracellular | 59.84 | 59.03 |
| TraesCS5A01G326100.1 | Wheat | golgi | 60.66 | 58.89 |
| TraesCS5B01G326500.1 | Wheat | extracellular | 60.66 | 58.89 |
| HORVU5Hr1G082810.1 | Barley | vacuole | 60.66 | 58.89 |
| TraesCS5D01G332200.1 | Wheat | extracellular | 60.66 | 58.89 |
| KXG26035 | Sorghum | endoplasmic reticulum, golgi, vacuole | 54.37 | 58.88 |
| HORVU7Hr1G074340.1 | Barley | plastid | 38.8 | 58.68 |
| TraesCS2A01G273100.1 | Wheat | golgi | 60.66 | 58.58 |
| TraesCS2D01G272400.1 | Wheat | endoplasmic reticulum, golgi | 57.65 | 57.49 |
| HORVU4Hr1G082210.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 40.71 | 56.87 |
| CDX82031 | Canola | nucleus | 38.52 | 53.21 |
| KRH49717 | Soybean | endoplasmic reticulum | 24.86 | 51.7 |
| CDY56961 | Canola | endoplasmic reticulum | 50.82 | 51.1 |
| CDX73424 | Canola | extracellular | 50.55 | 50.82 |
| CDY42605 | Canola | plastid | 28.96 | 50.0 |
| HORVU2Hr1G066680.1 | Barley | endoplasmic reticulum | 50.27 | 48.68 |
| Os04t0311400-01 | Rice | nucleus | 48.09 | 45.83 |
| CDY14798 | Canola | extracellular | 12.57 | 37.7 |
| CDY19784 | Canola | cytosol, nucleus, plastid | 24.32 | 37.08 |
| CDY09216 | Canola | vacuole | 36.07 | 36.77 |
| CDY09213 | Canola | vacuole | 35.52 | 36.21 |
| CDX80173 | Canola | endoplasmic reticulum | 34.97 | 35.75 |
| CDY31550 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.43 | 35.1 |
| CDX88753 | Canola | vacuole | 31.97 | 33.52 |
| CDX71035 | Canola | vacuole | 27.32 | 29.15 |
| CDX71045 | Canola | endoplasmic reticulum | 28.14 | 28.45 |
| CDY64994 | Canola | cytosol, nucleus, vacuole | 17.21 | 25.4 |
| CDX85150 | Canola | extracellular, golgi, vacuole | 19.95 | 21.41 |
| CDY58223 | Canola | vacuole | 20.22 | 20.67 |
| CDY61859 | Canola | extracellular, golgi, vacuole | 20.49 | 20.6 |
| CDY07129 | Canola | extracellular | 19.95 | 20.39 |
| CDX88755 | Canola | extracellular, plasma membrane, vacuole | 21.86 | 19.56 |
| CDY64824 | Canola | cytosol, mitochondrion, vacuole | 7.65 | 16.0 |
| CDY38163 | Canola | golgi, vacuole | 5.74 | 13.12 |
Protein Annotations
| MapMan:19.4.1.1 | Gene3D:3.90.70.10 | GO:A0A078DNI8 | MEROPS:C01.A06 | EnsemblPlants:CDX90537 | ProteinID:CDX90537 |
| ProteinID:CDX90537.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00151164001 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF519 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EECBDD |
Description
BnaA03g42440D
Coordinates
chrLK031863:-:738150..739499
Molecular Weight (calculated)
40722.4 Da
IEP (calculated)
7.669
GRAVY (calculated)
-0.317
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRAVFFLLI ASALFVTISG VADDGFGNPI KQVVREENDE QLLNLDHQFT LFKSKYEKTY KNQVEHDHRF RVFKANVRRA RRHQQLDPSA VHGVTQFSDV
101: TPKEFSRKYL GLKRRFSLPN DTQKAAILPT SELPTDFDWR EKGAVTPVKN QGLCGSCWSF SATGALEGAH FLATKELVSL SEQQLIDCDH TCDPQEANSC
201: DTGCRGGLMN NAFEYALKTG GLMKEQDYPY TGRDRSVCKF NKTMIAAKVS NFSVVSADED QIAANLVQNG PLAIAINALW MQTYIAGVSC PYVCSKNQDH
301: GVLLVGFGSA GYAPLRLEEK PYWIIKNSWG SMWGEKGYYK ICRGTPNICG VDTMVSTVAA VHTTPQ
101: TPKEFSRKYL GLKRRFSLPN DTQKAAILPT SELPTDFDWR EKGAVTPVKN QGLCGSCWSF SATGALEGAH FLATKELVSL SEQQLIDCDH TCDPQEANSC
201: DTGCRGGLMN NAFEYALKTG GLMKEQDYPY TGRDRSVCKF NKTMIAAKVS NFSVVSADED QIAANLVQNG PLAIAINALW MQTYIAGVSC PYVCSKNQDH
301: GVLLVGFGSA GYAPLRLEEK PYWIIKNSWG SMWGEKGYYK ICRGTPNICG VDTMVSTVAA VHTTPQ
001: MDRVVFFFLI AATLLAGSLG STVISGEVTD GFVNPIRQVV PEENDEQLLN AEHHFTLFKS KYEKTYATQV EHDHRFRVFK ANLRRARRNQ LLDPSAVHGV
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
101: TQFSDLTPKE FRRKFLGLKR RGFRLPTDTQ TAPILPTSDL PTEFDWREQG AVTPVKNQGM CGSCWSFSAI GALEGAHFLA TKELVSLSEQ QLVDCDHECD
201: PAQANSCDSG CSGGLMNNAF EYALKAGGLM KEEDYPYTGR DHTACKFDKS KIVASVSNFS VVSSDEDQIA ANLVQHGPLA IAINAMWMQT YIGGVSCPYV
301: CSKSQDHGVL LVGFGSSGYA PIRLKEKPYW IIKNSWGAMW GEHGYYKICR GPHNMCGMDT MVSTVAAVHT SPK
Arabidopsis Description
RD19CProbable cysteine protease RD19C [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.