Factsheet for Solyc11g008260.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079777	Potato	extracellular	96.37	96.37
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	64.51	68.41
CDY56961	Canola	endoplasmic reticulum	64.51	68.41
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	65.03	68.39
CDX73424	Canola	extracellular	64.25	68.13
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	66.06	68.0
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	60.1	66.29
KRH34798	Soybean	endoplasmic reticulum, golgi	64.51	65.53
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	58.03	62.05
TraesCS2A01G187400.1	Wheat	extracellular	55.96	59.67
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	55.96	58.38
TraesCS2D01G200500.1	Wheat	extracellular	55.44	57.84
EER97214	Sorghum	endoplasmic reticulum, extracellular	55.44	57.37
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	55.44	56.91
Zm00001d006364_P001	Maize	extracellular	54.15	56.79
Solyc04g080960.2.1	Tomato	extracellular	52.07	55.37
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	55.7	54.02
Solyc01g110110.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	51.55	53.93
Solyc07g041920.2.1	Tomato	extracellular, golgi, vacuole	24.09	35.77
Solyc07g041900.2.1	Tomato	extracellular	32.9	35.67
Solyc02g069110.2.1	Tomato	extracellular, golgi, vacuole	19.95	21.75
Solyc02g069090.2.1	Tomato	extracellular	19.17	21.02
Solyc02g069100.2.1	Tomato	plastid	18.39	20.06

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	MEROPS:C01.A05	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197
GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603
UniProt:K4D586	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF365	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS
InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848
SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g008260.1	EnsemblPlants:Solyc11g008260.1.1	UniParc:UPI000276A73F	:

Description

Probable cysteine protease RD19D [Source:Projected from Arabidopsis thaliana (AT3G54940) UniProtKB/Swiss-Prot;Acc:Q8VYS0]

Coordinates

chr11:+:2487182..2489778

Molecular Weight (calculated)

42462.6 Da

IEP (calculated)

7.868

GRAVY (calculated)

-0.307

Length

386 amino acids

Sequence
(BLAST)

001: MAKGGGLTYA LSVTILTCAF SLLPFHHTSA AAAVPEEFKI RQVTDGRNPT TTAHGGSNHH LLGTPAEHRF KSFIQEYNKE YSTREEYVHR LGVFVKNLLR
101: AAEHQALDPT AVHGVTQFSD LTSEEFERMY MGVKGGDRTS LLREFGSHAP PMEVKDLPNS FDWREKGAVT DVKMQGSCGS CWAFSTTGSI EGANFIATGK
201: LLNLSEQQLV DCDNTCDKKD RKACDSGCRG GLMTNAYKYL IEAGGIEEED SYPYTGKRGE CKFSPDKVAV KVSNFTNIPI DEQQIAAYLV NHGPLAVGLN
301: AVFMQTYIGG VSCPLICGKR WVNHGVLLVG YGSKGFSILR LSNQPYWIIK NSWGKRWGEN GYYKLCRGHG MCGMNTMVSA VMTQTS

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.