Factsheet for TraesCS2A01G187400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	98.07	95.95
TraesCS2D01G200500.1	Wheat	extracellular	95.86	93.78
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	96.13	87.44
Zm00001d006364_P001	Maize	extracellular	82.32	80.98
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	81.77	78.72
EER97214	Sorghum	endoplasmic reticulum, extracellular	80.94	78.55
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.57	66.76
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	59.39	57.33
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	58.01	57.22
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	54.7	56.57
Solyc11g008260.1.1	Tomato	extracellular	59.67	55.96
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	55.8	55.49
CDY56961	Canola	endoplasmic reticulum	55.52	55.22
PGSC0003DMT400079777	Potato	extracellular	58.84	55.18
CDX73424	Canola	extracellular	55.25	54.95
KRH34798	Soybean	endoplasmic reticulum, golgi	57.18	54.47
TraesCS5A01G326100.1	Wheat	golgi	55.25	53.05
TraesCS2A01G273100.1	Wheat	golgi	53.59	51.19
TraesCS5A01G210100.1	Wheat	unclear	34.25	33.97
TraesCS4A01G252900.1	Wheat	extracellular	21.27	21.94
TraesCS4A01G252800.1	Wheat	unclear	20.72	21.8
TraesCS4A01G252700.1	Wheat	extracellular	20.17	21.16

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF338
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2A01G187400
EnsemblPlants:TraesCS2A01G187400.1	TIGR:cd02248	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:149208513..149209680

Molecular Weight (calculated)

38296.9 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.043

Length

362 amino acids

Sequence
(BLAST)

001: MAARLVVLLL ALVHAGVSAE DVIRQVTDGG HGAGRPGLLP EAQFAAFVRR HGKQYSGPEE YARRLRVFAA NVARAAAHQA LDPGARHGVT PFSDLTREEF
101: EARLTGLAGA GDVLRSVRGM PAAAPATEEE VAALPASFDW RDKGAVTDVK MQGVCGSCWA FSTTGVVEGA NFVATGKLLN LSEQQLVDCD HTCDAVAKTE
201: CNSGCSGGLM TNAYKYLMSS GGLMEQAAYP YTGAQGTCRF DRSKVAVRVA NFTAVPLDED QMRAALVRGG PLAVGLNAAF MQTYVGGVSC PLICPRALVN
301: HGVLLVGYGA RGFSALRLGY RPYWLIKNSW GQQWGEGGYY KLCRGRNVCG VDSMVSAVAV AP

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.