CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006364_P001	Maize	extracellular	90.08	91.3
TraesCS2A01G187400.1	Wheat	extracellular	78.55	80.94
TraesCS2B01G219900.1	Wheat	endoplasmic reticulum, extracellular	79.09	79.73
TraesCS2D01G200500.1	Wheat	extracellular	78.28	78.92
Os07t0480900-01	Rice	endoplasmic reticulum, extracellular	76.68	76.06
HORVU2Hr1G036930.1	Barley	endoplasmic reticulum, extracellular, vacuole	79.36	74.37
GSMUA_Achr1P00410_001	Banana	endoplasmic reticulum, extracellular, vacuole	64.88	67.04
VIT_13s0019g05120.t01	Wine grape	extracellular, golgi, vacuole	57.37	57.07
KRG91982	Soybean	endoplasmic reticulum, golgi, vacuole	53.08	56.57
AT3G54940.2	Thale cress	endoplasmic reticulum, extracellular	54.96	55.86
Solyc11g008260.1.1	Tomato	extracellular	57.37	55.44
KRH34798	Soybean	endoplasmic reticulum, golgi	56.3	55.26
Bra007118.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	53.35	54.67
CDY56961	Canola	endoplasmic reticulum	53.35	54.67
PGSC0003DMT400079777	Potato	extracellular	56.3	54.4
CDX73424	Canola	extracellular	52.55	53.85
EES05034	Sorghum	endoplasmic reticulum	52.28	52.56
KXG26035	Sorghum	endoplasmic reticulum, golgi, vacuole	42.63	47.04
EER96801	Sorghum	endoplasmic reticulum, vacuole	34.05	34.99
KXG36303	Sorghum	vacuole	20.64	21.69

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EntrezGene:8077431	UniProt:C5X8J7	EnsemblPlants:EER97214	ProteinID:EER97214
ProteinID:EER97214.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576
GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	ProteinID:OQU89951.1	PFAM:PF00112
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF338	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	EnsemblPlantsGene:SORBI_3002G302300	SUPFAM:SSF54001
SignalP:SignalP-noTM	UniParc:UPI0001A83B38	RefSeq:XP_002460693.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:67857713..67859719

Molecular Weight (calculated)

39517.4 Da

IEP (calculated)

8.859

GRAVY (calculated)

-0.004

Length

373 amino acids

Sequence
(BLAST)

001: MASQLAVLLI LLLPLAGAST DDGFIRQVTD GRRSRAGAGA LGLLPEAQFA AFVRRHGRRY SGPEEYARRL RVFAANLARA AAHQALDPTA RHGVTPFSDL
101: TREEFEARLT GVRAGAGGDV QRLVMSGAPA APPASQEEVS RLPASFDWRD KGAVTGVKMQ GACGSCWAFS TTGAVEGANF LATGKLLELS EQQLVDCDHT
201: CSAVAQNECN NGCAGGLMTN AYAYLMKSGG LMEQRAYPYT GAPGPCRFDP AKAAVRVANF TAVPAGDEAQ IRAALVRRGP LAVGLNAAFM QTYVGGVSCP
301: LLCPRAWVNH GVLLVGYGAR GFAALRLGYR PYWIIKNSWG ERWGEQGYYR LCRGSNVCGV DSMVSAVAVA PVP

Best Arabidopsis Sequence Match ( AT3G54940.2 )
(BLAST)

001: MVAKALAQLI TCIILFCHVV ASVEDLTIRQ VTADNRRIRP NLLGTHTESK FRLFMSDYGK NYSTREEYIH RLGIFAKNVL KAAEHQMMDP SAVHGVTQFS
101: DLTEEEFKRM YTGVADVGGS RGGTVGAEAP MVEVDGLPED FDWREKGGVT EVKNQGACGS CWAFSTTGAA EGAHFVSTGK LLSLSEQQLV DCDQACDPKD
201: KKACDNGCGG GLMTNAYEYL MEAGGLEEER SYPYTGKRGH CKFDPEKVAV RVLNFTTIPL DENQIAANLV RHGPLAVGLN AVFMQTYIGG VSCPLICSKR
301: NVNHGVLLVG YGSKGFSILR LSNKPYWIIK NSWGKKWGEN GYYKLCRGHD ICGINSMVSA VATQVSS

Arabidopsis Description

RD19DProbable cysteine protease RD19D [Source:UniProtKB/Swiss-Prot;Acc:Q8VYS0]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.